org.pharmgkb.common.comparator

Class ChromosomeNameComparator

java.lang.Object

org.pharmgkb.common.comparator.ChromosomeNameComparator

All Implemented Interfaces:

java.util.Comparator<java.lang.String>

public class ChromosomeNameComparator
extends java.lang.Object
implements java.util.Comparator<java.lang.String>

Comparator for chromosome names. This expects the chromosome name to either be numeric, or start with "chr".

Constructor Summary

Constructors

Constructor and Description
ChromosomeNameComparator()

Method Summary

Modifier and Type	Method and Description
int	compare(java.lang.String name1, java.lang.String name2)
static java.util.Comparator<java.lang.String>	getComparator() Gets an instance of this comparator.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.util.Comparator

comparing, comparing, comparingDouble, comparingInt, comparingLong, equals, naturalOrder, nullsFirst, nullsLast, reversed, reverseOrder, thenComparing, thenComparing, thenComparing, thenComparingDouble, thenComparingInt, thenComparingLong

Constructor Detail

ChromosomeNameComparator

public ChromosomeNameComparator()

Method Detail

getComparator

public static java.util.Comparator<java.lang.String> getComparator()

Gets an instance of this comparator.

Returns:

an instance of this comparator

compare

public int compare(java.lang.String name1,
                   java.lang.String name2)

Specified by:

compare in interface java.util.Comparator<java.lang.String>