org.pharmgkb.parser.vcf

Interface VcfLineParser

All Known Implementing Classes:

MemoryMappedVcfLineParser, TransformingVcfLineParser

public interface VcfLineParser

This interface controls what is actually done for each data line in a VCF file.

Method Summary

Modifier and Type	Method and Description
void	parseLine(VcfMetadata metadata, VcfPosition position, java.util.List<VcfSample> sampleData)

Method Detail

parseLine

void parseLine(VcfMetadata metadata,
               VcfPosition position,
               java.util.List<VcfSample> sampleData)