Package org.pharmgkb.parser.vcf.model
package org.pharmgkb.parser.vcf.model
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ClassDescriptionA strictly validated VCF metadata ALT code of the form:
##ALT=<ID=type,Description=description>WhereIDis a colon-delimited list of identifiers.VCF metadata in the format XXX=<key=value,key=value,...>.VCF metadata for contig=<> elements.This class represents a single VCF FORMAT metadata line.This enum represents the Type field in a VCF FORMAT metadata line.This class represents a single VCF metadata line with an id and description.A VCF metadata element with an Id (called "ID").This class represents a single VCF INFO metadata line.This enum represents the Type field in a VCF INFO metadata line.A FORMAT field specified as reserved in the VCF specification.An INFO field specified as reserved in the VCF specification.A field specified as reserved in the VCF specification.A reserved identifier for VCF ALT codes of structural variants.A reserved value for the "Number" field in INFO and FORMAT metadata entries.This class captures all the VCF metadata from a VCF file.This class contains the basic data (the first 9 columns) for a VCF position line.This class contains sample data for a VCF position line.