Package org.pharmgkb.parser.vcf.model

Enum Class ReservedStructuralVariantCode

java.lang.Object

java.lang.Enum<ReservedStructuralVariantCode>

org.pharmgkb.parser.vcf.model.ReservedStructuralVariantCode

All Implemented Interfaces:

Serializable, Comparable<ReservedStructuralVariantCode>, Constable

public enum ReservedStructuralVariantCode
extends Enum<ReservedStructuralVariantCode>

A reserved identifier for VCF ALT codes of structural variants. Each reserved identifier has a level.

See Also:

• AltStructuralVariant

Nested Class Summary

Nested classes/interfaces inherited from class java.lang.Enum

Enum.EnumDesc<E extends Enum<E>>

Enum Constant Summary

Enum Constants

Enum Constant	Description
Cnv
Deletion
Duplication
Insertion
Inversion
MobileElement
Tandem

Method Summary

Modifier and Type	Method	Description
static ReservedStructuralVariantCode	fromId(String id)
String	getId()
int	getLevelInSpecification()
List<ReservedStructuralVariantCode>	getParentCodes()
static ReservedStructuralVariantCode	valueOf(String name)	Returns the enum constant of this class with the specified name.
static ReservedStructuralVariantCode[]	values()	Returns an array containing the constants of this enum class, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, describeConstable, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Details

Deletion

public static final ReservedStructuralVariantCode Deletion

Insertion

public static final ReservedStructuralVariantCode Insertion

Duplication

public static final ReservedStructuralVariantCode Duplication

Inversion

public static final ReservedStructuralVariantCode Inversion

Cnv

public static final ReservedStructuralVariantCode Cnv

Tandem

public static final ReservedStructuralVariantCode Tandem

MobileElement

public static final ReservedStructuralVariantCode MobileElement

Method Details

values

public static ReservedStructuralVariantCode[] values()

Returns an array containing the constants of this enum class, in the order they are declared.

Returns:

an array containing the constants of this enum class, in the order they are declared

valueOf

public static ReservedStructuralVariantCode valueOf(String name)

Returns the enum constant of this class with the specified name. The string must match exactly an identifier used to declare an enum constant in this class. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum class has no constant with the specified name

NullPointerException - if the argument is null

fromId

@Nullable
public static ReservedStructuralVariantCode fromId(@Nonnull
 String id)

getId

public String getId()

Returns:

The code (e.g. CNV)

getLevelInSpecification

public int getLevelInSpecification()

getParentCodes

public List<ReservedStructuralVariantCode> getParentCodes()