Serialized Form

Package org.sbml.jsbml.ext.comp

Class org.sbml.jsbml.ext.comp.AbstractNamedSBaseRef extends SBaseRef implements Serializable

serialVersionUID:

-7590217205832827913L

Class org.sbml.jsbml.ext.comp.CompModelPlugin extends CompSBasePlugin implements Serializable

serialVersionUID:

7104644706063096211L

Serialized Fields

listOfPorts

ListOf<T extends SBase> listOfPorts

listOfSubmodels

ListOf<T extends SBase> listOfSubmodels

mapOfPorts

java.util.Map<K extends java.lang.Object,V extends java.lang.Object> mapOfPorts

Maps between the Port identifiers and themselves.

Class org.sbml.jsbml.ext.comp.CompSBasePlugin extends AbstractSBasePlugin implements Serializable

serialVersionUID:

3364911411091523856L

Serialized Fields

listOfReplacedElements

ListOf<T extends SBase> listOfReplacedElements

replacedBy

ReplacedBy replacedBy

Class org.sbml.jsbml.ext.comp.CompSBMLDocumentPlugin extends CompSBasePlugin implements Serializable

serialVersionUID:

-6693188330172643491L

Serialized Fields

listOfExternalModelDefinitions

ListOf<T extends SBase> listOfExternalModelDefinitions

listOfModelDefinitions

ListOf<T extends SBase> listOfModelDefinitions

Class org.sbml.jsbml.ext.comp.Deletion extends AbstractNamedSBaseRef implements Serializable

serialVersionUID:

-568486978934971953L

Class org.sbml.jsbml.ext.comp.ExternalModelDefinition extends AbstractNamedSBase implements Serializable

serialVersionUID:

2005205309846284624L

Serialized Fields

md5

java.lang.String md5

modelRef

java.lang.String modelRef

source

java.lang.String source

The source of this model (anyURI): Specifies a file as relative or absolute path, URL or URN

Class org.sbml.jsbml.ext.comp.ModelDefinition extends Model implements Serializable

serialVersionUID:

11908580298395050L

Class org.sbml.jsbml.ext.comp.Port extends AbstractNamedSBaseRef implements Serializable

serialVersionUID:

-301236222127386488L

Class org.sbml.jsbml.ext.comp.ReplacedBy extends SBaseRef implements Serializable

serialVersionUID:

-7067666288732978615L

Serialized Fields

submodelRef

java.lang.String submodelRef

Class org.sbml.jsbml.ext.comp.ReplacedElement extends SBaseRef implements Serializable

serialVersionUID:

-1222530387127803035L

Serialized Fields

conversionFactor

java.lang.String conversionFactor

deletion

java.lang.String deletion

submodelRef

java.lang.String submodelRef

Class org.sbml.jsbml.ext.comp.SBaseRef extends AbstractSBase implements Serializable

serialVersionUID:

-4434500961448381830L

Serialized Fields

idRef

java.lang.String idRef

This attribute is used to refer to a regular identifier (i.e., the value of an id attribute on some other object), in the case when the reference being constructed with the SBaseRef is intended to refer to an object that does not have a port identifier. The namespace of the SIdRef value is the set of identifiers of type SId defined in the submodel, not the parent model.

metaIdRef

java.lang.String metaIdRef

This attribute is used to refer to a metaid attribute value on some other object, in the case when the reference being constructed with the SBaseRef is intended to refer to an object that does not have a port identifier. The namespace of the metaIdRef value is the entire document in which the referenced model resides

portRef

java.lang.String portRef

This attribute is used to refer to a port identifier, in the case when the reference being constructed with the SBaseRef is intended to refer to a port on a submodel. The namespace of the PortSIdRef value is the set of identifiers of type PortSId defined in the submodel, not the parent model.

sBaseRef

SBaseRef sBaseRef

An SBaseRef object may have up to one subcomponent named sBaseRef. This permits recursive structures to be constructed so that objects inside submodels can be referenced.

unitRef

java.lang.String unitRef

This attribute is used to refer to the identifier of a UnitDefinition object. The namespace of the UnitSIdRef value is the set of unit identifiers defined in the submodel, not the parent model.

Class org.sbml.jsbml.ext.comp.Submodel extends AbstractNamedSBase implements Serializable

serialVersionUID:

-2588930216065448311L

Serialized Fields

extentConversionFactor

java.lang.String extentConversionFactor

listOfDeletions

ListOf<T extends SBase> listOfDeletions

modelRef

java.lang.String modelRef

timeConversionFactor

java.lang.String timeConversionFactor