| Package | Description |
|---|---|
| org.sbml.jsbml.ext.fbc |
Provides classes for the
Flux Balance Constraints package (FBC).
|
| org.sbml.jsbml.ext.fbc.converters |
| Modifier and Type | Method and Description |
|---|---|
GeneProductAssociation |
GeneProductAssociation.clone() |
GeneProductAssociation |
FBCReactionPlugin.createGeneProductAssociation() |
GeneProductAssociation |
FBCReactionPlugin.createGeneProductAssociation(String id) |
GeneProductAssociation |
FBCReactionPlugin.getGeneProductAssociation()
Returns the value of
FBCReactionPlugin.geneProductAssociation. |
| Modifier and Type | Method and Description |
|---|---|
void |
FBCReactionPlugin.setGeneProductAssociation(GeneProductAssociation geneProductAssociation)
Sets the value of
FBCReactionPlugin.geneProductAssociation |
| Constructor and Description |
|---|
GeneProductAssociation(GeneProductAssociation gpa)
Creates a new
GeneProductAssociation instance. |
| Modifier and Type | Method and Description |
|---|---|
static GeneProductAssociation |
GPRParser.parseGPR(Reaction r,
String geneReactionRule,
boolean omitGenericTerms)
Parses a gene association string as used in COBRA in SBML level 2 into a
GeneProductAssociation
used in SBML level 3. |
static GeneProductAssociation |
GPRParser.parseGPR(Reaction r,
String geneReactionRule,
boolean omitGenericTerms,
boolean displayWarning)
Parses a gene association string as used in COBRA in SBML level 2 into a
GeneProductAssociation
used in SBML level 3. |
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