Package org.sbml.jsbml.ext.fbc.converters

Class CobraToFbcV2Converter

java.lang.Object

org.sbml.jsbml.ext.fbc.converters.CobraToFbcV2Converter

All Implemented Interfaces:

org.sbml.jsbml.util.converters.SBMLConverter

public class CobraToFbcV2Converter
extends java.lang.Object
implements org.sbml.jsbml.util.converters.SBMLConverter

Converts old COBRA SBML files to SBML level 3 FBC version 2.

Since:

1.3

Author:

Thomas Hamm, Nicolas Rodriguez

Constructor Summary

Constructors

Constructor	Description
CobraToFbcV2Converter()

Method Summary

Modifier and Type	Method	Description
SBMLDocument	convert(SBMLDocument sbmlDocument)
void	setOption(java.lang.String name, java.lang.String value)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

CobraToFbcV2Converter

public CobraToFbcV2Converter()

Method Detail

convert

public SBMLDocument convert(SBMLDocument sbmlDocument)
                     throws SBMLException

Specified by:

convert in interface org.sbml.jsbml.util.converters.SBMLConverter

Throws:

SBMLException

setOption

public void setOption(java.lang.String name,
                      java.lang.String value)

Specified by:

setOption in interface org.sbml.jsbml.util.converters.SBMLConverter