| Package | Description |
|---|---|
| org.sbml.jsbml.ext.layout |
Provides classes for the Layout
package.
|
| Modifier and Type | Class and Description |
|---|---|
class |
CompartmentGlyph
The
CompartmentGlyph class is derived from GraphicalObject
and inherits its attributes. |
class |
GeneralGlyph
The
GeneralGlyph is used to facilitate the representation of elements
other than Compartment, Species
and Reaction and thus
can be used for the display of relationships of Rule
or
elements defined by other SBML packages. |
class |
ReactionGlyph
Analogous to how a
Reaction object has to at least have one reactant
or product, the ReactionGlyph has to at least have one
SpeciesReferenceGlyph stored in the
ReactionGlyph.listOfSpeciesReferenceGlyphs. |
class |
ReferenceGlyph
The
ReferenceGlyph element describes the graphical connection between
an arbitrary GraphicalObject (or derived element) and a
GeneralGlyph (which would be an arrow or some curve in most cases). |
class |
SpeciesGlyph
The
SpeciesGlyph class has an optional species attribute, in
addition to to the attributes from GraphicalObject. |
class |
SpeciesReferenceGlyph
The
SpeciesReferenceGlyph class describes the graphical connection
between a SpeciesGlyph and a ReactionGlyph (which would be
an arrow or some curve in most cases). |
class |
TextGlyph
The
TextGlyph class describes the position and dimension of text labels. |
| Modifier and Type | Method and Description |
|---|---|
abstract AbstractReferenceGlyph |
AbstractReferenceGlyph.clone() |
| Constructor and Description |
|---|
AbstractReferenceGlyph(AbstractReferenceGlyph glyph)
Creates a new instance of
AbstractReferenceGlyph from the given glyph. |
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