Uses of Class
org.sbml.jsbml.ext.layout.GraphicalObject

Packages that use GraphicalObject

Package	Description
org.sbml.jsbml.ext.layout	Provides classes for the Layout package.

Uses of GraphicalObject in org.sbml.jsbml.ext.layout

Subclasses of GraphicalObject in org.sbml.jsbml.ext.layout

Modifier and Type	Class and Description
class	AbstractReferenceGlyph Abstract super class for all kinds of glyphs that graphically represent an instance of NamedSBase.
class	CompartmentGlyph The CompartmentGlyph class is derived from GraphicalObject and inherits its attributes.
class	GeneralGlyph The GeneralGlyph is used to facilitate the representation of elements other than Compartment, Species and Reaction and thus can be used for the display of relationships of Rule or elements defined by other SBML packages.
class	ReactionGlyph Analogous to how a Reaction object has to at least have one reactant or product, the ReactionGlyph has to at least have one SpeciesReferenceGlyph stored in the ReactionGlyph.listOfSpeciesReferenceGlyphs.
class	ReferenceGlyph The ReferenceGlyph element describes the graphical connection between an arbitrary GraphicalObject (or derived element) and a GeneralGlyph (which would be an arrow or some curve in most cases).
class	SpeciesGlyph The SpeciesGlyph class has an optional species attribute, in addition to to the attributes from GraphicalObject.
class	SpeciesReferenceGlyph The SpeciesReferenceGlyph class describes the graphical connection between a SpeciesGlyph and a ReactionGlyph (which would be an arrow or some curve in most cases).
class	TextGlyph The TextGlyph class describes the position and dimension of text labels.

Methods in org.sbml.jsbml.ext.layout that return GraphicalObject

Modifier and Type	Method and Description
GraphicalObject	GraphicalObject.clone()
GraphicalObject	GeneralGlyph.createGraphicalObject() Creates a new GraphicalObject element and adds it to the ListOfSubGlyphs list.
GraphicalObject	GeneralGlyph.createGraphicalObject(String id) Creates a new GraphicalObject element and adds it to the ListOfSubGlyphs list.
GraphicalObject	Layout.getAdditionalGraphicalObject(int i)
GraphicalObject	TextGlyph.getGraphicalObjectInstance() Direct access to the GraphicalObject linked to this TextGlyph.

Methods in org.sbml.jsbml.ext.layout that return types with arguments of type GraphicalObject

Modifier and Type	Method and Description
ListOf<GraphicalObject>	Layout.getListOfAdditionalGraphicalObjects()
ListOf<GraphicalObject>	GeneralGlyph.getListOfSubGlyphs() Returns the listOfSubGlyphs.

Methods in org.sbml.jsbml.ext.layout with parameters of type GraphicalObject

Modifier and Type	Method and Description
void	Layout.addAdditionalGraphicalObject(GraphicalObject object) Adds an arbitrary additional GraphicalObject.
void	Layout.addGraphicalObject(GraphicalObject object) Adds an arbitrary additional GraphicalObject.
boolean	GeneralGlyph.addSubGlyph(GraphicalObject subGlyph) Adds a new GraphicalObject to the listOfSubGlyphs.
boolean	GeneralGlyph.removeGeneralGlyph(GraphicalObject subGlyph) Removes an element from the listOfSubGlyphs.
boolean	GeneralGlyph.removeSubGlyph(GraphicalObject subGlyph) Removes an element from the listOfSubGlyphs.
void	TextGlyph.setGraphicalObject(GraphicalObject graphicalObject)

Method parameters in org.sbml.jsbml.ext.layout with type arguments of type GraphicalObject

Modifier and Type	Method and Description
void	Layout.setAddGraphicalObjects(ListOf<GraphicalObject> addGraphicalObjects) This element is optional.
void	Layout.setListOfAdditionalGraphicalObjects(ListOf<GraphicalObject> additionalGraphicalObjects) Sets the Layout.listOfAdditionalGraphicalObjects.
void	GeneralGlyph.setListOfSubGlyphs(ListOf<GraphicalObject> listOfSubGlyphs) The listOfSubGlyphs is an optional list that can contain sub-glyphs of the GeneralGlyph.

Constructors in org.sbml.jsbml.ext.layout with parameters of type GraphicalObject

Constructor and Description
GraphicalObject(GraphicalObject graphicalObject)