- getAllowsChildren() - Method in class org.sbml.jsbml.ext.multi.MultiEventAssignment
-
- getAllowsChildren() - Method in class org.sbml.jsbml.ext.multi.MultiInitialAssignment
-
- getAllowsChildren() - Method in class org.sbml.jsbml.ext.multi.MultiModel
-
- getAllowsChildren() - Method in class org.sbml.jsbml.ext.multi.MultiReaction
-
- getAllowsChildren() - Method in class org.sbml.jsbml.ext.multi.MultiRule
-
- getAllowsChildren() - Method in class org.sbml.jsbml.ext.multi.MultiSpecies
-
- getAllowsChildren() - Method in class org.sbml.jsbml.ext.multi.MultiSpeciesReference
-
- getBindingSiteReference1() - Method in class org.sbml.jsbml.ext.multi.Bond
-
- getBindingSiteReference2() - Method in class org.sbml.jsbml.ext.multi.Bond
-
- getBond(int) - Method in class org.sbml.jsbml.ext.multi.Selector
-
- getBond(String) - Method in class org.sbml.jsbml.ext.multi.Selector
-
Gets the
Bond that has the given id.
- getChildAt(int) - Method in class org.sbml.jsbml.ext.multi.Bond
-
- getChildAt(int) - Method in class org.sbml.jsbml.ext.multi.MultiEventAssignment
-
- getChildAt(int) - Method in class org.sbml.jsbml.ext.multi.MultiInitialAssignment
-
- getChildAt(int) - Method in class org.sbml.jsbml.ext.multi.MultiModel
-
- getChildAt(int) - Method in class org.sbml.jsbml.ext.multi.MultiReaction
-
- getChildAt(int) - Method in class org.sbml.jsbml.ext.multi.MultiRule
-
- getChildAt(int) - Method in class org.sbml.jsbml.ext.multi.MultiSpecies
-
- getChildAt(int) - Method in class org.sbml.jsbml.ext.multi.MultiSpeciesReference
-
- getChildAt(int) - Method in class org.sbml.jsbml.ext.multi.Selector
-
- getChildAt(int) - Method in class org.sbml.jsbml.ext.multi.SpeciesType
-
- getChildAt(int) - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeState
-
- getChildAt(int) - Method in class org.sbml.jsbml.ext.multi.StateFeature
-
- getChildAt(int) - Method in class org.sbml.jsbml.ext.multi.StateFeatureInstance
-
- getChildCount() - Method in class org.sbml.jsbml.ext.multi.Bond
-
- getChildCount() - Method in class org.sbml.jsbml.ext.multi.MultiEventAssignment
-
- getChildCount() - Method in class org.sbml.jsbml.ext.multi.MultiInitialAssignment
-
- getChildCount() - Method in class org.sbml.jsbml.ext.multi.MultiModel
-
- getChildCount() - Method in class org.sbml.jsbml.ext.multi.MultiReaction
-
- getChildCount() - Method in class org.sbml.jsbml.ext.multi.MultiRule
-
- getChildCount() - Method in class org.sbml.jsbml.ext.multi.MultiSpecies
-
- getChildCount() - Method in class org.sbml.jsbml.ext.multi.MultiSpeciesReference
-
- getChildCount() - Method in class org.sbml.jsbml.ext.multi.Selector
-
- getChildCount() - Method in class org.sbml.jsbml.ext.multi.SpeciesType
-
- getChildCount() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeState
-
- getChildCount() - Method in class org.sbml.jsbml.ext.multi.StateFeature
-
- getChildCount() - Method in class org.sbml.jsbml.ext.multi.StateFeatureInstance
-
- getConnex() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeState
-
- getContainedSpeciesType(int) - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeState
-
- getContainedSpeciesType(String) - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeState
-
- getCorrespondingReactant() - Method in class org.sbml.jsbml.ext.multi.ProductSpeciesReference
-
Returns the corresponding reactant.
- getElementNamespace() - Method in class org.sbml.jsbml.ext.multi.MultiEventAssignment
-
- getElementNamespace() - Method in class org.sbml.jsbml.ext.multi.MultiInitialAssignment
-
- getElementNamespace() - Method in class org.sbml.jsbml.ext.multi.MultiModel
-
- getElementNamespace() - Method in class org.sbml.jsbml.ext.multi.MultiReaction
-
- getElementNamespace() - Method in class org.sbml.jsbml.ext.multi.MultiRule
-
- getElementNamespace() - Method in class org.sbml.jsbml.ext.multi.MultiSpecies
-
- getElementNamespace() - Method in class org.sbml.jsbml.ext.multi.MultiSpeciesReference
-
- getInitialAmount() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeInstance
-
Returns the initialAmount.
- getInitialConcentration() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeInstance
-
Returns the initialConcentration.
- getInitialProportion() - Method in class org.sbml.jsbml.ext.multi.InitialSpeciesInstance
-
- getInitialSpeciesInstance(String) - Method in class org.sbml.jsbml.ext.multi.MultiSpecies
-
- getKineticLaw() - Method in class org.sbml.jsbml.ext.multi.ReactionRule
-
- getListOfBonds() - Method in class org.sbml.jsbml.ext.multi.Selector
-
Returns the listOfBonds
- getListOfConditions() - Method in class org.sbml.jsbml.ext.multi.ReactionRule
-
- getListOfContainedSpeciesTypes() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeState
-
Returns the listOfContainedSpeciesTypes
- getListOfPossibleValues() - Method in class org.sbml.jsbml.ext.multi.StateFeature
-
Returns the listOfPossibleValues
- getListOfReactionRules() - Method in class org.sbml.jsbml.ext.multi.MultiReaction
-
- getListOfResults() - Method in class org.sbml.jsbml.ext.multi.ReactionRule
-
- getListOfSBMLElementsToWrite(Object) - Method in class org.sbml.jsbml.xml.parsers.MultiParser
-
- getListOfSelectorReferences() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeInstance
-
- getListOfSelectors() - Method in class org.sbml.jsbml.ext.multi.MultiModel
-
Returns the listOfSelectors.
- getListOfSpeciesTypeInstances() - Method in class org.sbml.jsbml.ext.multi.MultiSpecies
-
- getListOfSpeciesTypeRestrictions() - Method in class org.sbml.jsbml.ext.multi.MultiSpeciesReference
-
- getListOfSpeciesTypes() - Method in class org.sbml.jsbml.ext.multi.MultiModel
-
Returns the listOfSpeciesTypes.
- getListOfSpeciesTypeStates() - Method in class org.sbml.jsbml.ext.multi.Selector
-
Returns the listOfSpeciesTypeStates
- getListOfStateFeatureInstances() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeState
-
Returns the listOfStateFeatureInstances
- getListOfStateFeatures() - Method in class org.sbml.jsbml.ext.multi.SpeciesType
-
Returns the listOfStateFeatures
- getListOfStateFeatureValues() - Method in class org.sbml.jsbml.ext.multi.StateFeatureInstance
-
Returns the listOfStateFeatureValues
- getListOfUnboundBindingSites() - Method in class org.sbml.jsbml.ext.multi.Selector
-
Returns the listOfUnboundBindingSites
- getMaxOccur() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeState
-
Returns the maxOccur.
- getMinOccur() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeState
-
Returns the minOccur.
- getModel() - Method in class org.sbml.jsbml.ext.multi.MultiModel
-
- getNamespaceFor(int, int, int) - Method in class org.sbml.jsbml.xml.parsers.MultiParser
-
- getNamespaces() - Method in class org.sbml.jsbml.xml.parsers.MultiParser
-
- getNamespaceURI(int, int) - Static method in class org.sbml.jsbml.ext.multi.MultiConstants
-
- getNamespaceURI() - Method in class org.sbml.jsbml.xml.parsers.MultiParser
-
- getOccurence() - Method in class org.sbml.jsbml.ext.multi.Bond
-
Returns the occurrence.
- getPackageName() - Method in class org.sbml.jsbml.ext.multi.MultiEventAssignment
-
- getPackageName() - Method in class org.sbml.jsbml.ext.multi.MultiInitialAssignment
-
- getPackageName() - Method in class org.sbml.jsbml.ext.multi.MultiModel
-
- getPackageName() - Method in class org.sbml.jsbml.ext.multi.MultiReaction
-
- getPackageName() - Method in class org.sbml.jsbml.ext.multi.MultiRule
-
- getPackageName() - Method in class org.sbml.jsbml.ext.multi.MultiSpecies
-
- getPackageName() - Method in class org.sbml.jsbml.ext.multi.MultiSpeciesReference
-
- getPackageName() - Method in class org.sbml.jsbml.xml.parsers.MultiParser
-
- getPackageNamespaces() - Method in class org.sbml.jsbml.xml.parsers.MultiParser
-
- getParent() - Method in class org.sbml.jsbml.ext.multi.MultiEventAssignment
-
- getParent() - Method in class org.sbml.jsbml.ext.multi.MultiInitialAssignment
-
- getParent() - Method in class org.sbml.jsbml.ext.multi.MultiModel
-
- getParent() - Method in class org.sbml.jsbml.ext.multi.MultiReaction
-
- getParent() - Method in class org.sbml.jsbml.ext.multi.MultiRule
-
- getParent() - Method in class org.sbml.jsbml.ext.multi.MultiSpecies
-
- getParent() - Method in class org.sbml.jsbml.ext.multi.MultiSpeciesReference
-
- getParentSBMLObject() - Method in class org.sbml.jsbml.ext.multi.MultiEventAssignment
-
- getParentSBMLObject() - Method in class org.sbml.jsbml.ext.multi.MultiInitialAssignment
-
- getParentSBMLObject() - Method in class org.sbml.jsbml.ext.multi.MultiModel
-
- getParentSBMLObject() - Method in class org.sbml.jsbml.ext.multi.MultiReaction
-
- getParentSBMLObject() - Method in class org.sbml.jsbml.ext.multi.MultiRule
-
- getParentSBMLObject() - Method in class org.sbml.jsbml.ext.multi.MultiSpecies
-
- getParentSBMLObject() - Method in class org.sbml.jsbml.ext.multi.MultiSpeciesReference
-
- getPossibleValue(int) - Method in class org.sbml.jsbml.ext.multi.StateFeature
-
- getPossibleValue(String) - Method in class org.sbml.jsbml.ext.multi.StateFeature
-
- getPossibleValue() - Method in class org.sbml.jsbml.ext.multi.StateFeatureValue
-
Returns the possibleValue
- getPrefix() - Method in class org.sbml.jsbml.ext.multi.MultiEventAssignment
-
- getPrefix() - Method in class org.sbml.jsbml.ext.multi.MultiInitialAssignment
-
- getPrefix() - Method in class org.sbml.jsbml.ext.multi.MultiModel
-
- getPrefix() - Method in class org.sbml.jsbml.ext.multi.MultiReaction
-
- getPrefix() - Method in class org.sbml.jsbml.ext.multi.MultiRule
-
- getPrefix() - Method in class org.sbml.jsbml.ext.multi.MultiSpecies
-
- getPrefix() - Method in class org.sbml.jsbml.ext.multi.MultiSpeciesReference
-
- getSaturated() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeState
-
- getSelector() - Method in class org.sbml.jsbml.ext.multi.InitialSpeciesInstance
-
- getSelector(int) - Method in class org.sbml.jsbml.ext.multi.MultiModel
-
- getSelector(String) - Method in class org.sbml.jsbml.ext.multi.MultiModel
-
Gets the
Selector that has the given id.
- getSelector() - Method in class org.sbml.jsbml.ext.multi.SelectorReference
-
Returns the selector.
- getSelectorInstance() - Method in class org.sbml.jsbml.ext.multi.InitialSpeciesInstance
-
- getShortLabel() - Method in class org.sbml.jsbml.xml.parsers.MultiParser
-
- getSpeciesType(int) - Method in class org.sbml.jsbml.ext.multi.MultiModel
-
- getSpeciesType(String) - Method in class org.sbml.jsbml.ext.multi.MultiModel
-
- getSpeciesType() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeState
-
Returns the speciesType.
- getSpeciesTypeInstance(int) - Method in class org.sbml.jsbml.ext.multi.MultiSpecies
-
- getSpeciesTypeInstance() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeInstanceChange
-
Returns the speciesTypeInstance.
- getSpeciesTypeInstance() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeRestriction
-
Returns the speciesTypeInstance.
- getSpeciesTypeRestriction() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeRestrictionReference
-
- getSpeciesTypeState() - Method in class org.sbml.jsbml.ext.multi.BindingSiteReference
-
Returns the speciesTypeState.
- getSpeciesTypeState() - Method in class org.sbml.jsbml.ext.multi.ContainedSpeciesType
-
Returns the speciesTypeState.
- getSpeciesTypeState(int) - Method in class org.sbml.jsbml.ext.multi.Selector
-
- getSpeciesTypeState(String) - Method in class org.sbml.jsbml.ext.multi.Selector
-
- getStateFeature(int) - Method in class org.sbml.jsbml.ext.multi.SpeciesType
-
- getStateFeature(String) - Method in class org.sbml.jsbml.ext.multi.SpeciesType
-
- getStateFeature() - Method in class org.sbml.jsbml.ext.multi.StateFeatureInstance
-
Returns the stateFeature.
- getStateFeatureInstance(int) - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeState
-
- getStateFeatureInstance(String) - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeState
-
- getStateFeatureValue(int) - Method in class org.sbml.jsbml.ext.multi.StateFeatureInstance
-
- getStateFeatureValue(String) - Method in class org.sbml.jsbml.ext.multi.StateFeatureInstance
-
- getUnboundBindingSite(int) - Method in class org.sbml.jsbml.ext.multi.Selector
-
- getUnboundBindingSite(String) - Method in class org.sbml.jsbml.ext.multi.Selector
-
- getURI() - Method in class org.sbml.jsbml.ext.multi.MultiEventAssignment
-
- getURI() - Method in class org.sbml.jsbml.ext.multi.MultiInitialAssignment
-
- getURI() - Method in class org.sbml.jsbml.ext.multi.MultiModel
-
- getURI() - Method in class org.sbml.jsbml.ext.multi.MultiReaction
-
- getURI() - Method in class org.sbml.jsbml.ext.multi.MultiRule
-
- getURI() - Method in class org.sbml.jsbml.ext.multi.MultiSpecies
-
- getURI() - Method in class org.sbml.jsbml.ext.multi.MultiSpeciesReference
-
- initDefaults() - Method in class org.sbml.jsbml.ext.multi.BindingSiteReference
-
- initDefaults() - Method in class org.sbml.jsbml.ext.multi.Bond
-
- initDefaults() - Method in class org.sbml.jsbml.ext.multi.ContainedSpeciesType
-
- initDefaults() - Method in class org.sbml.jsbml.ext.multi.PossibleValue
-
- initDefaults() - Method in class org.sbml.jsbml.ext.multi.Selector
-
- initDefaults() - Method in class org.sbml.jsbml.ext.multi.SpeciesType
-
- initDefaults() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeRestrictionReference
-
Initializes the default values using the namespace.
- initDefaults() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeState
-
- initDefaults() - Method in class org.sbml.jsbml.ext.multi.StateFeature
-
- initDefaults() - Method in class org.sbml.jsbml.ext.multi.StateFeatureInstance
-
- initDefaults() - Method in class org.sbml.jsbml.ext.multi.StateFeatureValue
-
- InitialSpeciesInstance - Class in org.sbml.jsbml.ext.multi
-
- InitialSpeciesInstance() - Constructor for class org.sbml.jsbml.ext.multi.InitialSpeciesInstance
-
- InitialSpeciesInstance(InitialSpeciesInstance) - Constructor for class org.sbml.jsbml.ext.multi.InitialSpeciesInstance
-
- isBindingSite() - Method in class org.sbml.jsbml.ext.multi.SpeciesType
-
- isConnex() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeState
-
- isIdMandatory() - Method in class org.sbml.jsbml.ext.multi.InitialSpeciesInstance
-
- isIdMandatory() - Method in class org.sbml.jsbml.ext.multi.PossibleValue
-
- isIdMandatory() - Method in class org.sbml.jsbml.ext.multi.ReactionRule
-
- isIdMandatory() - Method in class org.sbml.jsbml.ext.multi.Selector
-
- isIdMandatory() - Method in class org.sbml.jsbml.ext.multi.SpeciesType
-
- isIdMandatory() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeInstance
-
- isIdMandatory() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeRestriction
-
- isIdMandatory() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeState
-
- isIdMandatory() - Method in class org.sbml.jsbml.ext.multi.StateFeature
-
- isIdMandatory() - Method in class org.sbml.jsbml.ext.multi.StateFeatureInstance
-
- isNegation() - Method in class org.sbml.jsbml.ext.multi.SelectorReference
-
Returns the negation.
- isRequired() - Method in class org.sbml.jsbml.xml.parsers.MultiParser
-
- isSaturated() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeState
-
- isSetBindingSite() - Method in class org.sbml.jsbml.ext.multi.SpeciesType
-
- isSetBindingSiteReference1() - Method in class org.sbml.jsbml.ext.multi.Bond
-
- isSetBindingSiteReference2() - Method in class org.sbml.jsbml.ext.multi.Bond
-
- isSetConnex() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeState
-
Returns true if connex is not null.
- isSetInitialProportion() - Method in class org.sbml.jsbml.ext.multi.InitialSpeciesInstance
-
- isSetKineticLaw() - Method in class org.sbml.jsbml.ext.multi.ReactionRule
-
- isSetListOfBonds() - Method in class org.sbml.jsbml.ext.multi.Selector
-
Returns true if the listOfBond is set.
- isSetListOfContainedSpeciesTypes() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeState
-
Returns true if the listOfContainedSpeciesType is set.
- isSetListOfPossibleValues() - Method in class org.sbml.jsbml.ext.multi.StateFeature
-
Returns true if the listOfPossibleValue is set.
- isSetListOfSelectors() - Method in class org.sbml.jsbml.ext.multi.MultiModel
-
Returns true if the listOfSelector is set.
- isSetListOfSpeciesInstances() - Method in class org.sbml.jsbml.ext.multi.MultiSpecies
-
- isSetListOfSpeciesTypes() - Method in class org.sbml.jsbml.ext.multi.MultiModel
-
Returns true if the listOfSpeciesType is set.
- isSetListOfSpeciesTypeStates() - Method in class org.sbml.jsbml.ext.multi.Selector
-
Returns true if the listOfSpeciesTypeState is set.
- isSetListOfStateFeatureInstances() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeState
-
Returns true if the listOfStateFeatureInstance is set.
- isSetListOfStateFeatures() - Method in class org.sbml.jsbml.ext.multi.SpeciesType
-
Returns true if the listOfStateFeature is set.
- isSetListOfStateFeatureValues() - Method in class org.sbml.jsbml.ext.multi.StateFeatureInstance
-
Returns true if the listOfStateFeatureValue is set.
- isSetListOfUnboundBindingSites() - Method in class org.sbml.jsbml.ext.multi.Selector
-
Returns true if the listOfUnBoundBindingSite is set.
- isSetMaxOccur() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeState
-
Returns true if maxOccur is not null.
- isSetMinOccur() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeState
-
Returns true if minOccur is not null.
- isSetOccurence() - Method in class org.sbml.jsbml.ext.multi.Bond
-
Returns true if the occurrence is set.
- isSetPossibleValue() - Method in class org.sbml.jsbml.ext.multi.StateFeatureValue
-
Returns true if possibleValue is set.
- isSetSaturated() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeState
-
Returns true if saturated is not null.
- isSetSelector() - Method in class org.sbml.jsbml.ext.multi.InitialSpeciesInstance
-
- isSetSelectorInstance() - Method in class org.sbml.jsbml.ext.multi.InitialSpeciesInstance
-
- isSetSpeciesType() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeState
-
Returns true if the speciesType is defined.
- isSetSpeciesTypeRestriction() - Method in class org.sbml.jsbml.ext.multi.SpeciesTypeRestrictionReference
-
- isSetSpeciesTypeState() - Method in class org.sbml.jsbml.ext.multi.BindingSiteReference
-
Returns true if the speciesTypeState is set.
- isSetSpeciesTypeState() - Method in class org.sbml.jsbml.ext.multi.ContainedSpeciesType
-
Returns true if the speciesTypeState is set.
- isSetStateFeature() - Method in class org.sbml.jsbml.ext.multi.StateFeatureInstance
-
Returns true if the stateFeature id is defined.