org.sbml.jsbml.ext.multi

Class StateFeatureInstance

java.lang.Object

org.sbml.jsbml.AbstractTreeNode

org.sbml.jsbml.AbstractSBase

org.sbml.jsbml.AbstractNamedSBase

org.sbml.jsbml.ext.multi.StateFeatureInstance

All Implemented Interfaces:

Serializable, Cloneable, TreeNode, NamedSBase, SBase, TreeNodeWithChangeSupport

public class StateFeatureInstance
extends AbstractNamedSBase

Since:

1.0

Version:

$Rev$

Author:

Nicolas Rodriguez

See Also:

Serialized Form

Last modified:

16.10.2013

Field Summary

Fields inherited from class org.sbml.jsbml.AbstractSBase

ignoredExtensions, ignoredXMLElements

Fields inherited from class org.sbml.jsbml.AbstractTreeNode

listOfListeners, parent, UNKNOWN_ATTRIBUTES, UNKNOWN_ELEMENTS

Constructor Summary

Constructors

Constructor and Description
StateFeatureInstance() Creates a new StateFeatureInstance.

Method Summary

Modifier and Type	Method and Description
void	addStateFeatureValue(StateFeatureValue stateFeatureValue) Adds a StateFeatureValue.
AbstractSBase	clone()
StateFeatureValue	createStateFeatureValue() Creates a new StateFeatureValue inside this StateFeatureInstance and returns it.
TreeNode	getChildAt(int index)
int	getChildCount()
ListOf<StateFeatureValue>	getListOfStateFeatureValues() Returns the listOfStateFeatureValues
String	getStateFeature() Returns the stateFeature.
StateFeatureValue	getStateFeatureValue(int i) Gets the ith StateFeatureValue.
StateFeatureValue	getStateFeatureValue(String id) Gets the StateFeatureValue that has the given id.
void	initDefaults()
boolean	isIdMandatory()
boolean	isSetListOfStateFeatureValues() Returns true if the listOfStateFeatureValue is set.
boolean	isSetStateFeature() Returns true if the stateFeature id is defined.
boolean	readAttribute(String attributeName, String prefix, String value)
void	setStateFeature(String stateFeature) Sets the stateFeature.
boolean	unsetListOfStateFeatureValues() Sets the listOfStateFeatureValues to null
Map<String,String>	writeXMLAttributes()

Methods inherited from class org.sbml.jsbml.AbstractNamedSBase

equals, getId, getName, hashCode, isSetId, isSetName, isValidId, setId, setName, toString, unsetId, unsetName

Methods inherited from class org.sbml.jsbml.AbstractSBase

addCVTerm, addDeclaredNamespace, addExtension, addPlugin, appendNotes, appendNotes, checkLevelAndVersionCompatibility, createHistory, createPlugin, disablePackage, enablePackage, enablePackage, filterCVTerms, filterCVTerms, filterCVTerms, filterCVTerms, fireNodeRemovedEvent, firePropertyChange, getAllowsChildren, getAnnotation, getAnnotationString, getCVTerm, getCVTermCount, getCVTerms, getDeclaredNamespaces, getElementName, getExtension, getExtensionCount, getExtensionPackages, getHistory, getIdManager, getLevel, getLevelAndVersion, getMetaId, getModel, getNamespace, getNotes, getNotesString, getNumCVTerms, getNumPlugins, getParent, getParentSBMLObject, getPlugin, getSBMLDocument, getSBOTerm, getSBOTermID, getVersion, hasValidAnnotation, hasValidLevelVersionNamespaceCombination, isExtendedByOtherPackages, isPackageEnabled, isPackageURIEnabled, isPkgEnabled, isPkgURIEnabled, isSetAnnotation, isSetHistory, isSetLevel, isSetLevelAndVersion, isSetMetaId, isSetNotes, isSetParentSBMLObject, isSetPlugin, isSetSBOTerm, isSetVersion, isValidLevelAndVersionCombination, isValidMetaId, notifyChildChange, registerChild, removeCVTerm, removeCVTerm, setAnnotation, setHistory, setLevel, setMetaId, setNamespace, setNotes, setNotes, setParentSBML, setParentSBMLObject, setSBOTerm, setSBOTerm, setThisAsParentSBMLObject, setVersion, unregisterChild, unsetAnnotation, unsetCVTerms, unsetExtension, unsetHistory, unsetMetaId, unsetNamespace, unsetNotes, unsetPlugin, unsetSBOTerm

Methods inherited from class org.sbml.jsbml.AbstractTreeNode

addAllChangeListeners, addAllChangeListeners, addTreeNodeChangeListener, addTreeNodeChangeListener, children, clearUserObjects, containsUserObjectKey, filter, filter, filter, fireNodeAddedEvent, getIndex, getListOfTreeNodeChangeListeners, getNumChildren, getRoot, getTreeNodeChangeListenerCount, getUserObject, indexOf, isLeaf, isRoot, isSetParent, isSetUserObjects, putUserObject, removeAllTreeNodeChangeListeners, removeAllTreeNodeChangeListeners, removeFromParent, removeTreeNodeChangeListener, removeTreeNodeChangeListener, removeUserObject, setParent, userObjectKeySet

Methods inherited from class java.lang.Object

finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface org.sbml.jsbml.SBase

addCVTerm, addDeclaredNamespace, addExtension, addPlugin, appendNotes, appendNotes, createPlugin, disablePackage, enablePackage, enablePackage, filterCVTerms, filterCVTerms, filterCVTerms, filterCVTerms, getAnnotation, getAnnotationString, getCVTerm, getCVTermCount, getCVTerms, getDeclaredNamespaces, getElementName, getExtension, getExtensionCount, getExtensionPackages, getHistory, getLevel, getLevelAndVersion, getMetaId, getModel, getNamespace, getNotes, getNotesString, getNumCVTerms, getNumPlugins, getParentSBMLObject, getPlugin, getSBMLDocument, getSBOTerm, getSBOTermID, getVersion, hasValidAnnotation, hasValidLevelVersionNamespaceCombination, isExtendedByOtherPackages, isPackageEnabled, isPackageURIEnabled, isPkgEnabled, isPkgURIEnabled, isSetAnnotation, isSetHistory, isSetLevel, isSetLevelAndVersion, isSetMetaId, isSetNotes, isSetParentSBMLObject, isSetPlugin, isSetSBOTerm, isSetVersion, registerChild, removeCVTerm, removeCVTerm, removeTreeNodeChangeListener, setAnnotation, setHistory, setLevel, setMetaId, setNotes, setNotes, setSBOTerm, setSBOTerm, setThisAsParentSBMLObject, setVersion, unregisterChild, unsetAnnotation, unsetCVTerms, unsetExtension, unsetHistory, unsetMetaId, unsetNotes, unsetPlugin, unsetSBOTerm

Methods inherited from interface org.sbml.jsbml.util.TreeNodeWithChangeSupport

addAllChangeListeners, addAllChangeListeners, addTreeNodeChangeListener, addTreeNodeChangeListener, clearUserObjects, containsUserObjectKey, filter, filter, filter, fireNodeAddedEvent, fireNodeRemovedEvent, firePropertyChange, getListOfTreeNodeChangeListeners, getRoot, getTreeNodeChangeListenerCount, getUserObject, isRoot, isSetParent, isSetUserObjects, putUserObject, removeAllTreeNodeChangeListeners, removeAllTreeNodeChangeListeners, removeFromParent, removeTreeNodeChangeListener, removeUserObject, userObjectKeySet

Methods inherited from interface javax.swing.tree.TreeNode

children, getAllowsChildren, getIndex, getParent, isLeaf

Constructor Detail

StateFeatureInstance

public StateFeatureInstance()

Creates a new StateFeatureInstance.

Method Detail

isIdMandatory

public boolean isIdMandatory()

clone

public AbstractSBase clone()

Specified by:

clone in interface SBase

Overrides:

clone in class AbstractSBase

getStateFeature

public String getStateFeature()

Returns the stateFeature.

Returns:

the stateFeature

setStateFeature

public void setStateFeature(String stateFeature)

Sets the stateFeature.

Parameters:

stateFeature - the stateFeature to set

isSetStateFeature

public boolean isSetStateFeature()

Returns true if the stateFeature id is defined.

Returns:

true if the stateFeature id is defined.

getListOfStateFeatureValues

public ListOf<StateFeatureValue> getListOfStateFeatureValues()

Returns the listOfStateFeatureValues

Returns:

the listOfStateFeatureValues

addStateFeatureValue

public void addStateFeatureValue(StateFeatureValue stateFeatureValue)

Adds a StateFeatureValue.

Parameters:

stateFeatureValue - the StateFeatureValue to add

createStateFeatureValue

public StateFeatureValue createStateFeatureValue()

Creates a new StateFeatureValue inside this StateFeatureInstance and returns it.

Returns:

the StateFeatureValue object created

getStateFeatureValue

public StateFeatureValue getStateFeatureValue(int i)

Gets the ith StateFeatureValue.

Parameters:

i -

Returns:

the ith StateFeatureValue

Throws:

IndexOutOfBoundsException - if the index is invalid.

getStateFeatureValue

public StateFeatureValue getStateFeatureValue(String id)

Gets the StateFeatureValue that has the given id.

Parameters:

id -

Returns:

the StateFeatureValue that has the given id or null if no StateFeatureValue are found that match id.

isSetListOfStateFeatureValues

public boolean isSetListOfStateFeatureValues()

Returns true if the listOfStateFeatureValue is set.

Returns:

true if the listOfStateFeatureValue is set.

unsetListOfStateFeatureValues

public boolean unsetListOfStateFeatureValues()

Sets the listOfStateFeatureValues to null

Returns:

true is successful

initDefaults

public void initDefaults()

getChildAt

public TreeNode getChildAt(int index)

Specified by:

getChildAt in interface TreeNode

Overrides:

getChildAt in class AbstractSBase

getChildCount

public int getChildCount()

Specified by:

getChildCount in interface TreeNode

Overrides:

getChildCount in class AbstractSBase

readAttribute

public boolean readAttribute(String attributeName,
                             String prefix,
                             String value)

Specified by:

readAttribute in interface SBase

Overrides:

readAttribute in class AbstractNamedSBase

writeXMLAttributes

public Map<String,String> writeXMLAttributes()

Specified by:

writeXMLAttributes in interface SBase

Overrides:

writeXMLAttributes in class AbstractNamedSBase