Uses of Class
org.sbml.jsbml.ext.qual.QualitativeSpecies

Packages that use QualitativeSpecies

Package	Description
org.sbml.jsbml.ext.qual	Provides classes for the Qualitative Models package.

Uses of QualitativeSpecies in org.sbml.jsbml.ext.qual

Methods in org.sbml.jsbml.ext.qual that return QualitativeSpecies

Modifier and Type	Method	Description
QualitativeSpecies	QualitativeSpecies.clone()
QualitativeSpecies	QualModelPlugin.createQualitativeSpecies()	Creates a new QualitativeSpecies inside this QualModelPlugin and returns it.
QualitativeSpecies	QualModelPlugin.createQualitativeSpecies(java.lang.String id)	Creates a new QualitativeSpecies inside this QualModelPlugin and returns it.
QualitativeSpecies	QualModelPlugin.createQualitativeSpecies(java.lang.String id, java.lang.String compartment, boolean constant)	Creates a new QualitativeSpecies inside this QualModelPlugin and returns it.
QualitativeSpecies	QualModelPlugin.createQualitativeSpecies(java.lang.String id, java.lang.String metaId, Species species)	Creates a new QualitativeSpecies, based on an existing Species, adds it to this QualModelPlugin and returns it.
QualitativeSpecies	QualModelPlugin.createQualitativeSpecies(java.lang.String id, Compartment c)	Creates a new Species inside this Model and returns it.
QualitativeSpecies	QualModelPlugin.createQualitativeSpecies(java.lang.String id, Compartment compartment, boolean constant)	Creates a new QualitativeSpecies inside this QualModelPlugin and returns it.
QualitativeSpecies	QualModelPlugin.getQualitativeSpecies(int i)	Gets the ith QualitativeSpecies.
QualitativeSpecies	QualModelPlugin.getQualitativeSpecies(java.lang.String id)	Gets the QualitativeSpecies that has the given id.
QualitativeSpecies	Input.getQualitativeSpeciesInstance()
QualitativeSpecies	Output.getQualitativeSpeciesInstance()

Methods in org.sbml.jsbml.ext.qual that return types with arguments of type QualitativeSpecies

Modifier and Type	Method	Description
ListOf<QualitativeSpecies>	QualModelPlugin.getListOfQualitativeSpecies()

Methods in org.sbml.jsbml.ext.qual with parameters of type QualitativeSpecies

Modifier and Type	Method	Description
void	QualModelPlugin.addQualitativeSpecies(QualitativeSpecies qualitativeSpecies)	Adds a QualitativeSpecies to the model.
boolean	QualModelPlugin.addSpecies(QualitativeSpecies spec)	Adds a QualitativeSpecies instance to the listOfSpecies of this Model.
boolean	QualModelPlugin.containsQualitativeSpecies(QualitativeSpecies qs)	Returns true if qs is already part of this QualModelPlugin
Input	Transition.createInput(java.lang.String id, QualitativeSpecies qualitativeSpecies, InputTransitionEffect transitionEffect)
Output	Transition.createOutput(java.lang.String id, QualitativeSpecies qualitativeSpecies, OutputTransitionEffect transitionEffect)
boolean	QualModelPlugin.removeQualitativeSpecies(QualitativeSpecies qualitativeSpecies)

Method parameters in org.sbml.jsbml.ext.qual with type arguments of type QualitativeSpecies

Modifier and Type	Method	Description
void	QualModelPlugin.setListOfQualitativeSpecies(ListOf<QualitativeSpecies> listOfQualitativeSpecies)	QualModelPlugin may contain at most one listOfQualitativeSpecies which must contain at least on QualitativeSpecies.

Constructors in org.sbml.jsbml.ext.qual with parameters of type QualitativeSpecies

Constructor	Description
Input(java.lang.String id, QualitativeSpecies qualitativeSpecies, InputTransitionEffect transitionEffect)	Creates a new Input instance.
Output(java.lang.String id, QualitativeSpecies qualitativeSpecies, OutputTransitionEffect transitionEffect)	Creates a new Output instance.
Output(QualitativeSpecies qualitativeSpecies, OutputTransitionEffect transitionEffect)	Creates a new Output instance.
QualitativeSpecies(QualitativeSpecies qualSpecies)	Creates a new QualitativeSpecies instance.