org.sbml.jsbml.ext.render.director

Class GlyphCreator

java.lang.Object

org.sbml.jsbml.ext.render.director.GlyphCreator

public class GlyphCreator
extends Object

This class creates a SBML layout for a model without layout information. It adds glyphs for every species including text labels, reaction and compartment.

Since:

1.4

Author:

Jan Rudolph

Field Summary

Fields

Modifier and Type	Field and Description
static String	LAYOUT_LINK

Constructor Summary

Constructors

Constructor and Description
GlyphCreator(Model model)

Method Summary

Modifier and Type	Method and Description
void	create() compartment, species, reactions, textglyph TODO do not create one glyph per species, instead create exactly one glyph for each species that acts as a main substrate and product and create multiple glyphs for all species that act as side-substrates or side products this produces a far more useful graph

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

LAYOUT_LINK

public static final String LAYOUT_LINK

See Also:

Constant Field Values

Constructor Detail

GlyphCreator

public GlyphCreator(Model model)

Parameters:

model -

Method Detail

create

public void create()

compartment, species, reactions, textglyph TODO

• do not create one glyph per species, instead create exactly one glyph for each species that acts as a main substrate and product and create multiple glyphs for all species that act as side-substrates or side products
• this produces a far more useful graph