org.sbml.jsbml.ext.spatial

Class CSGHomogeneousTransformation

java.lang.Object

org.sbml.jsbml.AbstractTreeNode

org.sbml.jsbml.AbstractSBase

org.sbml.jsbml.ext.spatial.AbstractSpatialNamedSBase

org.sbml.jsbml.ext.spatial.CSGNode

org.sbml.jsbml.ext.spatial.CSGTransformation

org.sbml.jsbml.ext.spatial.CSGHomogeneousTransformation

All Implemented Interfaces:

Serializable, Cloneable, TreeNode, SpatialNamedSBase, org.sbml.jsbml.SBase, org.sbml.jsbml.util.TreeNodeWithChangeSupport

public class CSGHomogeneousTransformation
extends CSGTransformation

Since:

1.0

Version:

$Rev$

Author:

Alex-Thomas, Piero Dalle Pezze

See Also:

Serialized Form

Last modified:

Jan 20, 2014

Field Summary

Fields inherited from class org.sbml.jsbml.AbstractSBase

ignoredExtensions, ignoredXMLElements, packageName

Fields inherited from class org.sbml.jsbml.AbstractTreeNode

listOfListeners, parent, resourceBundle, UNKNOWN_ATTRIBUTES, UNKNOWN_ELEMENTS

Constructor Summary

Constructors

Constructor and Description
CSGHomogeneousTransformation()
CSGHomogeneousTransformation(CSGHomogeneousTransformation csght)
CSGHomogeneousTransformation(int level, int version)
CSGHomogeneousTransformation(String id, int level, int version)

Method Summary

Modifier and Type	Method and Description
CSGHomogeneousTransformation	clone()
boolean	equals(Object object)
boolean	getAllowsChildren()
TreeNode	getChildAt(int index)
int	getChildCount()
TransformationComponent	getForwardTransformation() Returns the value of forwardTransformation
TransformationComponent	getReverseTransformation() Returns the value of reverseTransformation
int	hashCode()
boolean	isSetForwardTransformation() Returns whether forwardTransformation is set
boolean	isSetReverseTransformation() Returns whether reverseTransformation is set
void	setForwardTransformation(TransformationComponent forwardTransformation) Sets the value of forwardTransformation
void	setReverseTransformation(TransformationComponent reverseTransformation) Sets the value of reverseTransformation
String	toString()
boolean	unsetForwardTransformation() Unsets the variable forwardTransformation
boolean	unsetReverseTransformation() Unsets the variable reverseTransformation

Methods inherited from class org.sbml.jsbml.ext.spatial.CSGTransformation

getCSGNode, isSetCSGNode, setCSGNode, unsetCSGNode

Methods inherited from class org.sbml.jsbml.ext.spatial.AbstractSpatialNamedSBase

getSpatialId, initDefaults, isSetSpatialId, readAttribute, setSpatialId, unsetSpatialId, writeXMLAttributes

Methods inherited from class org.sbml.jsbml.AbstractSBase

addCVTerm, addDeclaredNamespace, addExtension, addPlugin, appendAnnotation, appendAnnotation, appendNotes, appendNotes, checkAndSetPackageNamespaceAndVersion, checkAndSetPackageNamespaceAndVersion, checkLevelAndVersionCompatibility, createHistory, createPlugin, disablePackage, enablePackage, enablePackage, filterCVTerms, filterCVTerms, filterCVTerms, filterCVTerms, fireNodeRemovedEvent, firePropertyChange, getAnnotation, getAnnotationString, getCVTerm, getCVTermCount, getCVTerms, getDeclaredNamespaces, getElementName, getExtension, getExtensionCount, getExtensionPackages, getHistory, getIdManager, getLevel, getLevelAndVersion, getMetaId, getModel, getNamespace, getNotes, getNotesString, getNumCVTerms, getNumPlugins, getPackageName, getPackageVersion, getParent, getParentSBMLObject, getPlugin, getSBMLDocument, getSBOTerm, getSBOTermID, getURI, getVersion, hasValidAnnotation, hasValidLevelVersionNamespaceCombination, isExtendedByOtherPackages, isPackageEnabled, isPackageURIEnabled, isPkgEnabled, isPkgURIEnabled, isSetAnnotation, isSetHistory, isSetLevel, isSetLevelAndVersion, isSetMetaId, isSetNotes, isSetPackageVErsion, isSetParentSBMLObject, isSetPlugin, isSetSBOTerm, isSetVersion, isValidLevelAndVersionCombination, isValidMetaId, notifyChildChange, registerChild, removeCVTerm, removeCVTerm, setAnnotation, setAnnotation, setAnnotation, setHistory, setLevel, setMetaId, setNamespace, setNotes, setNotes, setPackageVersion, setParentSBML, setParentSBMLObject, setSBOTerm, setSBOTerm, setThisAsParentSBMLObject, setVersion, unregisterChild, unsetAnnotation, unsetCVTerms, unsetExtension, unsetHistory, unsetMetaId, unsetNamespace, unsetNotes, unsetPlugin, unsetSBOTerm

Methods inherited from class org.sbml.jsbml.AbstractTreeNode

addAllChangeListeners, addAllChangeListeners, addTreeNodeChangeListener, addTreeNodeChangeListener, children, clearUserObjects, containsUserObjectKey, filter, filter, filter, fireNodeAddedEvent, getIndex, getListOfTreeNodeChangeListeners, getNumChildren, getRoot, getTreeNodeChangeListenerCount, getUserObject, indexOf, isLeaf, isRoot, isSetParent, isSetUserObjects, putUserObject, removeAllTreeNodeChangeListeners, removeAllTreeNodeChangeListeners, removeFromParent, removeTreeNodeChangeListener, removeTreeNodeChangeListener, removeUserObject, setParent, userObjectKeySet

Methods inherited from class java.lang.Object

finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface org.sbml.jsbml.SBase

addCVTerm, addDeclaredNamespace, addExtension, addPlugin, appendAnnotation, appendAnnotation, appendNotes, appendNotes, createPlugin, disablePackage, enablePackage, enablePackage, filterCVTerms, filterCVTerms, filterCVTerms, filterCVTerms, getAnnotation, getAnnotationString, getCVTerm, getCVTermCount, getCVTerms, getDeclaredNamespaces, getElementName, getExtension, getExtensionCount, getExtensionPackages, getHistory, getLevel, getLevelAndVersion, getMetaId, getModel, getNamespace, getNotes, getNotesString, getNumCVTerms, getNumPlugins, getPackageName, getPackageVersion, getParentSBMLObject, getPlugin, getSBMLDocument, getSBOTerm, getSBOTermID, getURI, getVersion, hasValidAnnotation, hasValidLevelVersionNamespaceCombination, isExtendedByOtherPackages, isPackageEnabled, isPackageURIEnabled, isPkgEnabled, isPkgURIEnabled, isSetAnnotation, isSetHistory, isSetLevel, isSetLevelAndVersion, isSetMetaId, isSetNotes, isSetPackageVErsion, isSetParentSBMLObject, isSetPlugin, isSetSBOTerm, isSetVersion, registerChild, removeCVTerm, removeCVTerm, removeTreeNodeChangeListener, setAnnotation, setAnnotation, setAnnotation, setHistory, setLevel, setMetaId, setNotes, setNotes, setPackageVersion, setSBOTerm, setSBOTerm, setThisAsParentSBMLObject, setVersion, unregisterChild, unsetAnnotation, unsetCVTerms, unsetExtension, unsetHistory, unsetMetaId, unsetNotes, unsetPlugin, unsetSBOTerm

Methods inherited from interface org.sbml.jsbml.util.TreeNodeWithChangeSupport

addAllChangeListeners, addAllChangeListeners, addTreeNodeChangeListener, addTreeNodeChangeListener, clearUserObjects, containsUserObjectKey, filter, filter, filter, fireNodeAddedEvent, fireNodeRemovedEvent, firePropertyChange, getListOfTreeNodeChangeListeners, getRoot, getTreeNodeChangeListenerCount, getUserObject, isRoot, isSetParent, isSetUserObjects, putUserObject, removeAllTreeNodeChangeListeners, removeAllTreeNodeChangeListeners, removeFromParent, removeTreeNodeChangeListener, removeUserObject, userObjectKeySet

Methods inherited from interface javax.swing.tree.TreeNode

children, getIndex, getParent, isLeaf

Constructor Detail

CSGHomogeneousTransformation

public CSGHomogeneousTransformation()

CSGHomogeneousTransformation

public CSGHomogeneousTransformation(CSGHomogeneousTransformation csght)

Parameters:

csght -

CSGHomogeneousTransformation

public CSGHomogeneousTransformation(int level,
                                    int version)

Parameters:

level -

version -

CSGHomogeneousTransformation

public CSGHomogeneousTransformation(String id,
                                    int level,
                                    int version)

Parameters:

id -

level -

version -

Method Detail

clone

public CSGHomogeneousTransformation clone()

Specified by:

clone in interface org.sbml.jsbml.SBase

Specified by:

clone in class AbstractSpatialNamedSBase

hashCode

public int hashCode()

Specified by:

hashCode in interface org.sbml.jsbml.SBase

Overrides:

hashCode in class AbstractSpatialNamedSBase

equals

public boolean equals(Object object)

Specified by:

equals in interface org.sbml.jsbml.SBase

Overrides:

equals in class CSGTransformation

getForwardTransformation

public TransformationComponent getForwardTransformation()

Returns the value of forwardTransformation

Returns:

the value of forwardTransformation

isSetForwardTransformation

public boolean isSetForwardTransformation()

Returns whether forwardTransformation is set

Returns:

whether forwardTransformation is set

setForwardTransformation

public void setForwardTransformation(TransformationComponent forwardTransformation)

Sets the value of forwardTransformation

Parameters:

forwardTransformation -

unsetForwardTransformation

public boolean unsetForwardTransformation()

Unsets the variable forwardTransformation

Returns:

true, if forwardTransformation was set before, otherwise false

getReverseTransformation

public TransformationComponent getReverseTransformation()

Returns the value of reverseTransformation

Returns:

the value of reverseTransformation

isSetReverseTransformation

public boolean isSetReverseTransformation()

Returns whether reverseTransformation is set

Returns:

whether reverseTransformation is set

setReverseTransformation

public void setReverseTransformation(TransformationComponent reverseTransformation)

Sets the value of reverseTransformation

Parameters:

reverseTransformation -

unsetReverseTransformation

public boolean unsetReverseTransformation()

Unsets the variable reverseTransformation

Returns:

true, if reverseTransformation was set before, otherwise false

getAllowsChildren

public boolean getAllowsChildren()

Specified by:

getAllowsChildren in interface TreeNode

Overrides:

getAllowsChildren in class CSGTransformation

getChildCount

public int getChildCount()

Specified by:

getChildCount in interface TreeNode

Overrides:

getChildCount in class CSGTransformation

getChildAt

public TreeNode getChildAt(int index)

Specified by:

getChildAt in interface TreeNode

Overrides:

getChildAt in class CSGTransformation

toString

public String toString()

Overrides:

toString in class AbstractSpatialNamedSBase