Uses of Class
org.seqdoop.hadoop_bam.cli.CLIMRPlugin

Packages that use CLIMRPlugin

Package	Description
org.seqdoop.hadoop_bam.cli
org.seqdoop.hadoop_bam.cli.plugins
org.seqdoop.hadoop_bam.cli.plugins.chipster

Uses of CLIMRPlugin in org.seqdoop.hadoop_bam.cli

Subclasses of CLIMRPlugin in org.seqdoop.hadoop_bam.cli

Modifier and Type	Class and Description
class	CLIMRBAMPlugin Like CLIMRPlugin, with added useful defaults for plugins working solely on BAM/SAM files.

Uses of CLIMRPlugin in org.seqdoop.hadoop_bam.cli.plugins

Subclasses of CLIMRPlugin in org.seqdoop.hadoop_bam.cli.plugins

Modifier and Type	Class and Description
class	FixMate
class	Sort
class	VCFSort

Uses of CLIMRPlugin in org.seqdoop.hadoop_bam.cli.plugins.chipster

Subclasses of CLIMRPlugin in org.seqdoop.hadoop_bam.cli.plugins.chipster

Modifier and Type	Class and Description
class	Summarize
class	SummarySort