org.seqdoop.hadoop_bam

Class LazyVCFGenotypesContext.Parser

java.lang.Object

org.seqdoop.hadoop_bam.LazyParsingGenotypesContext.Parser

org.seqdoop.hadoop_bam.LazyVCFGenotypesContext.Parser

All Implemented Interfaces:

htsjdk.variant.variantcontext.LazyGenotypesContext.LazyParser

Enclosing class:

LazyVCFGenotypesContext

public static class LazyVCFGenotypesContext.Parser
extends LazyParsingGenotypesContext.Parser

Constructor Summary

Constructors

Constructor and Description
Parser(List<htsjdk.variant.variantcontext.Allele> alleles, String chrom, int start)

Method Summary

Modifier and Type	Method and Description
htsjdk.variant.variantcontext.LazyGenotypesContext.LazyData	parse(Object data)
void	setHeaderDataCache(LazyParsingGenotypesContext.HeaderDataCache data)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Parser

public Parser(List<htsjdk.variant.variantcontext.Allele> alleles,
              String chrom,
              int start)

Method Detail

setHeaderDataCache

public void setHeaderDataCache(LazyParsingGenotypesContext.HeaderDataCache data)

Specified by:

setHeaderDataCache in class LazyParsingGenotypesContext.Parser

parse

public htsjdk.variant.variantcontext.LazyGenotypesContext.LazyData parse(Object data)