org.spdx.rdfparser

Class SpdxDocumentContainer

java.lang.Object

org.spdx.rdfparser.SpdxDocumentContainer

All Implemented Interfaces:

IModelContainer, SpdxRdfConstants

public class SpdxDocumentContainer
extends Object
implements IModelContainer, SpdxRdfConstants

This class contains the SPDX Document and provides some of the basic RDF model support. This class also manages the SpdxRef, ExtractedLicenseInfos, and LicenseRefs. Separating the container aspects of the SpdxDocument into this separate class allows for the SpdxDocument to follow the rdfparser.model pattern.

Author:

Gary O'Neall

Field Summary

Fields

Modifier and Type	Field and Description
static String	CURRENT_IMPLEMENTATION_VERSION
static String	CURRENT_SPDX_VERSION
protected int	nextLicenseRef Keeps tract of the next license reference number when generating the license ID's for non-standard licenses
static String	ONE_DOT_ONE_SPDX_VERSION
static String	ONE_DOT_TWO_SPDX_VERSION
static String	ONE_DOT_ZERO_SPDX_VERSION
static String	POINT_EIGHT_SPDX_VERSION
static String	POINT_NINE_SPDX_VERSION
static String	TWO_POINT_ONE_VERSION
static String	TWO_POINT_ZERO_VERSION

Fields inherited from interface org.spdx.rdfparser.SpdxRdfConstants

ALGORITHM_SHA1, CLASS_ANNOTATION, CLASS_DOAP_PROJECT, CLASS_EXTERNAL_DOC_REF, CLASS_OR_LATER_OPERATOR, CLASS_POINTER_BYTE_OFFSET_POINTER, CLASS_POINTER_LINE_CHAR_POINTER, CLASS_POINTER_START_END_POINTER, CLASS_RELATIONSHIP, CLASS_SPDX_ANY_LICENSE_INFO, CLASS_SPDX_CHECKSUM, CLASS_SPDX_CONJUNCTIVE_LICENSE_SET, CLASS_SPDX_CREATION_INFO, CLASS_SPDX_DISJUNCTIVE_LICENSE_SET, CLASS_SPDX_DOCUMENT, CLASS_SPDX_ELEMENT, CLASS_SPDX_EXTERNAL_REFERENCE, CLASS_SPDX_EXTRACTED_LICENSING_INFO, CLASS_SPDX_FILE, CLASS_SPDX_ITEM, CLASS_SPDX_LICENSE, CLASS_SPDX_LICENSE_EXCEPTION, CLASS_SPDX_PACKAGE, CLASS_SPDX_REFERENCE_TYPE, CLASS_SPDX_REVIEW, CLASS_SPDX_SIMPLE_LICENSE_INFO, CLASS_SPDX_SNIPPET, CLASS_SPDX_VERIFICATIONCODE, CLASS_WITH_EXCEPTION_OPERATOR, CREATOR_PREFIX_ORGANIZATION, CREATOR_PREFIX_PERSON, CREATOR_PREFIX_TOOL, DOAP_NAMESPACE, EXTERNAL_DOC_REF_PATTERN, EXTERNAL_DOC_REF_PRENUM, EXTERNAL_ELEMENT_REF_PATTERN, FILE_TYPE_ARCHIVE, FILE_TYPE_BINARY, FILE_TYPE_OTHER, FILE_TYPE_SOURCE, LICENSE_ID_PATTERN, LICENSE_ID_PATTERN_NUMERIC, LICENSEXML_ATTRIBUTE_ALT_MATCH, LICENSEXML_ATTRIBUTE_ALT_NAME, LICENSEXML_ATTRIBUTE_DEPRECATED, LICENSEXML_ATTRIBUTE_DEPRECATED_VERSION, LICENSEXML_ATTRIBUTE_ID, LICENSEXML_ATTRIBUTE_LIST_VERSION_ADDED, LICENSEXML_ATTRIBUTE_NAME, LICENSEXML_ATTRIBUTE_OSI_APPROVED, LICENSEXML_ELEMENT_ALT, LICENSEXML_ELEMENT_BREAK, LICENSEXML_ELEMENT_BULLET, LICENSEXML_ELEMENT_COPYRIGHT_TEXT, LICENSEXML_ELEMENT_CROSS_REF, LICENSEXML_ELEMENT_CROSS_REFS, LICENSEXML_ELEMENT_EXAMPLE, LICENSEXML_ELEMENT_EXCEPTION, LICENSEXML_ELEMENT_ITEM, LICENSEXML_ELEMENT_LICENSE, LICENSEXML_ELEMENT_LICENSE_COLLECTION, LICENSEXML_ELEMENT_LIST, LICENSEXML_ELEMENT_NOTES, LICENSEXML_ELEMENT_OPTIONAL, LICENSEXML_ELEMENT_PARAGRAPH, LICENSEXML_ELEMENT_STANDARD_LICENSE_HEADER, LICENSEXML_ELEMENT_TITLE_TEXT, LICENSEXML_URI, NOASSERTION_VALUE, NON_STD_LICENSE_ID_PRENUM, NONE_VALUE, OWL_NAMESPACE, PROP_ANNOTATION, PROP_ANNOTATION_DATE, PROP_ANNOTATION_TYPE, PROP_ANNOTATOR, PROP_CHECKSUM_ALGORITHM, PROP_CHECKSUM_ALGORITHM_SHA1, PROP_CHECKSUM_VALUE, PROP_COPYRIGHT_TEXT, PROP_CREATION_CREATED, PROP_CREATION_CREATOR, PROP_EXAMPLE, PROP_EXCEPTION_TEXT, PROP_EXTERNAL_DOC_CHECKSUM, PROP_EXTERNAL_DOC_ID, PROP_EXTERNAL_REF, PROP_EXTERNAL_SPDX_DOCUMENT, PROP_EXTRACTED_TEXT, PROP_FILE_ARTIFACTOF, PROP_FILE_CHECKSUM, PROP_FILE_CONTRIBUTOR, PROP_FILE_COPYRIGHT, PROP_FILE_FILE_DEPENDENCY, PROP_FILE_LIC_COMMENTS, PROP_FILE_LICENSE, PROP_FILE_NAME, PROP_FILE_NOTICE, PROP_FILE_SEEN_LICENSE, PROP_FILE_TYPE, PROP_FILE_TYPE_ARCHIVE, PROP_FILE_TYPE_BINARY, PROP_FILE_TYPE_OTHER, PROP_FILE_TYPE_SOURCE, PROP_LIC_COMMENTS, PROP_LIC_ID_DEPRECATED, PROP_LICENSE_CONCLUDED, PROP_LICENSE_DECLARED, PROP_LICENSE_EXCEPTION, PROP_LICENSE_EXCEPTION_ID, PROP_LICENSE_ID, PROP_LICENSE_INFO_FROM_SNIPPETS, PROP_LICENSE_LIST_VERSION, PROP_LICENSE_NAME, PROP_LICENSE_SET_MEMEBER, PROP_LICENSE_TEXT, PROP_NAME, PROP_OWL_SAME_AS, PROP_PACKAGE_CHECKSUM, PROP_PACKAGE_CONCLUDED_LICENSE, PROP_PACKAGE_DECLARED_COPYRIGHT, PROP_PACKAGE_DECLARED_LICENSE, PROP_PACKAGE_DECLARED_NAME, PROP_PACKAGE_DESCRIPTION, PROP_PACKAGE_DOWNLOAD_URL, PROP_PACKAGE_FILE, PROP_PACKAGE_FILE_NAME, PROP_PACKAGE_FILES_ANALYZED, PROP_PACKAGE_LICENSE_COMMENT, PROP_PACKAGE_LICENSE_INFO_FROM_FILES, PROP_PACKAGE_ORIGINATOR, PROP_PACKAGE_SHORT_DESC, PROP_PACKAGE_SOURCE_INFO, PROP_PACKAGE_SUPPLIER, PROP_PACKAGE_VERIFICATION_CODE, PROP_PACKAGE_VERSION_INFO, PROP_POINTER_END_POINTER, PROP_POINTER_LINE_NUMBER, PROP_POINTER_OFFSET, PROP_POINTER_REFERENCE, PROP_POINTER_START_POINTER, PROP_PROJECT_HOMEPAGE, PROP_PROJECT_NAME, PROP_REFERENCE_CATEGORY, PROP_REFERENCE_LOCATOR, PROP_REFERENCE_TYPE, PROP_RELATED_SPDX_ELEMENT, PROP_RELATIONSHIP, PROP_RELATIONSHIP_TYPE, PROP_REVIEW_DATE, PROP_REVIEW_REVIEWER, PROP_SNIPPET_FROM_FILE, PROP_SNIPPET_RANGE, PROP_SPDX_CREATION_INFO, PROP_SPDX_DATA_LICENSE, PROP_SPDX_EXTERNAL_DOC_REF, PROP_SPDX_EXTRACTED_LICENSES, PROP_SPDX_FILE_REFERENCE, PROP_SPDX_PACKAGE, PROP_SPDX_REVIEWED_BY, PROP_SPDX_VERSION, PROP_STD_LICENSE_HEADER_VERSION_1, PROP_STD_LICENSE_NAME, PROP_STD_LICENSE_NAME_VERSION_1, PROP_STD_LICENSE_NOTES_VERSION_1, PROP_STD_LICENSE_NOTICE, PROP_STD_LICENSE_OSI_APPROVED, PROP_STD_LICENSE_OSI_APPROVED_VERSION_1, PROP_STD_LICENSE_TEMPLATE, PROP_STD_LICENSE_TEMPLATE_VERSION_1, PROP_STD_LICENSE_URL_VERSION_1, PROP_VALUE_NOASSERTION, PROP_VALUE_NONE, PROP_VERIFICATIONCODE_IGNORED_FILES, PROP_VERIFICATIONCODE_VALUE, RDF_NAMESPACE, RDF_POINTER_NAMESPACE, RDF_PROP_RESOURCE, RDF_PROP_TYPE, RDFS_NAMESPACE, RDFS_PROP_COMMENT, RDFS_PROP_LABEL, RDFS_PROP_SEE_ALSO, SPDX_DATA_LICENSE_ID, SPDX_DATA_LICENSE_ID_VERSION_1_0, SPDX_DATE_FORMAT, SPDX_DOCUMENT_ID, SPDX_ELEMENT_REF_PATTERN, SPDX_ELEMENT_REF_PRENUM, SPDX_LISTED_REFERENCE_TYPES_PREFIX, SPDX_NAMESPACE, SPDX_VERSION_PATTERN, STANDARD_LICENSE_URL, TERM_LICENSE_NOASSERTION, TERM_LICENSE_NONE, URI_VALUE_NOASSERTION, URI_VALUE_NONE

Constructor Summary

Constructors

Constructor and Description
SpdxDocumentContainer(org.apache.jena.rdf.model.Model model) Construct an SpdxDocumentContainer from an existing model which already contain an SPDX Document
SpdxDocumentContainer(String uri) Creates a new empty SPDX Document with the current SPDX document version.
SpdxDocumentContainer(String uri, String spdxVersion) Creates a new empty SPDX Document.

Method Summary

Modifier and Type	Method and Description
boolean	addCheckNodeObject(org.apache.jena.graph.Node node, IRdfModel nodeObject) Add a node object to the container.
void	addElement(SpdxElement element) Add an SPDX element directly to the model without connecting it to any properties
void	addExtractedLicenseInfos(ExtractedLicenseInfo license)
void	addNewExtractedLicenseInfo(ExtractedLicenseInfo license) Adds the license as a new ExtractedLicenseInfo
ExtractedLicenseInfo	addNewExtractedLicenseInfo(String licenseText) Adds a new non-standard license containing the text provided.
void	addSpdxElementRef(String elementRef) Notifies the model container that a new element ref is in use.
org.apache.jena.rdf.model.Resource	createResource(org.apache.jena.rdf.model.Resource duplicate, String uri, org.apache.jena.rdf.model.Resource type, IRdfModel nodeObject) Create a resource in the model
String	documentNamespaceToId(String externalNamespace) Translate an external document namespace URI to an external document ID
String	externalDocumentIdToNamespace(String docId) Translate an external document ID to the external document's namespace
boolean	extractedLicenseExists(String id)
List<SpdxElement>	findAllElements() Returns all elements in the contains
List<SpdxFile>	findAllFiles()
List<SpdxPackage>	findAllPackages()
List<SpdxSnippet>	findAllSnippets()
SpdxElement	findElementById(String id) Find an element within the container by the SPDX Identifier.
static String	formNonStandardLicenseID(int idNum)
static String	formSpdxElementRef(int refNum)
String	getDocumentNamespace()
static int	getElementRefNumber(String elementReference) Parses out the reference number for an SPDX element reference
ExternalDocumentRef[]	getExternalDocumentRefs()
ExtractedLicenseInfo	getExtractedLicense(String id)
ExtractedLicenseInfo[]	getExtractedLicenseInfos()
void	getExtractedLicenseInfosFromModel() Get Update the extrated license infos from the model and resynchronize it with the license cache.
SpdxFile[]	getFileReferences() get all file references contained within the container
int	getLicenseRefNum(String licenseID) Parses a license ID and return the integer representing the ID number (e.g.
org.apache.jena.rdf.model.Model	getModel()
String	getNextLicenseRef()
String	getNextSpdxElementRef()
SpdxDocument	getSpdxDocument()
void	initializeNextLicenseRef() Initialize the next license reference and the cache of extracted license infos
void	setExternalDocumentRefs(ExternalDocumentRef[] externalDocumentRefs)
void	setExtractedLicenseInfos(ExtractedLicenseInfo[] extractedLicenseInfos)
boolean	spdxElementRefExists(String elementRef) Returns true if the element reference already exists in the model
String	verifySpdxVersion(String spdxVersion)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

POINT_EIGHT_SPDX_VERSION

public static final String POINT_EIGHT_SPDX_VERSION

See Also:

Constant Field Values

POINT_NINE_SPDX_VERSION

public static final String POINT_NINE_SPDX_VERSION

See Also:

Constant Field Values

ONE_DOT_ZERO_SPDX_VERSION

public static final String ONE_DOT_ZERO_SPDX_VERSION

See Also:

Constant Field Values

ONE_DOT_ONE_SPDX_VERSION

public static final String ONE_DOT_ONE_SPDX_VERSION

See Also:

Constant Field Values

ONE_DOT_TWO_SPDX_VERSION

public static final String ONE_DOT_TWO_SPDX_VERSION

See Also:

Constant Field Values

TWO_POINT_ZERO_VERSION

public static final String TWO_POINT_ZERO_VERSION

See Also:

Constant Field Values

TWO_POINT_ONE_VERSION

public static final String TWO_POINT_ONE_VERSION

See Also:

Constant Field Values

CURRENT_SPDX_VERSION

public static final String CURRENT_SPDX_VERSION

See Also:

Constant Field Values

CURRENT_IMPLEMENTATION_VERSION

public static final String CURRENT_IMPLEMENTATION_VERSION

See Also:

Constant Field Values

nextLicenseRef

protected int nextLicenseRef

Keeps tract of the next license reference number when generating the license ID's for non-standard licenses

Constructor Detail

SpdxDocumentContainer

public SpdxDocumentContainer(org.apache.jena.rdf.model.Model model)
                      throws InvalidSPDXAnalysisException

Construct an SpdxDocumentContainer from an existing model which already contain an SPDX Document

Parameters:

model -

Throws:

InvalidSPDXAnalysisException

SpdxDocumentContainer

public SpdxDocumentContainer(String uri)
                      throws InvalidSPDXAnalysisException

Creates a new empty SPDX Document with the current SPDX document version. Note: Follow-up calls MUST be made to add the required properties for this to be a valid SPDX document

Parameters:

uri - URI for the SPDX Document

Throws:

InvalidSPDXAnalysisException

SpdxDocumentContainer

public SpdxDocumentContainer(String uri,
                             String spdxVersion)
                      throws InvalidSPDXAnalysisException

Creates a new empty SPDX Document. Note: Follow-up calls MUST be made to add the required properties for this to be a valid SPDX document

Parameters:

uri - URI for the SPDX Document

spdxVersion - The version of SPDX analysis to create (impacts the data license for some versions)

Throws:

InvalidSPDXAnalysisException

Method Detail

getModel

public org.apache.jena.rdf.model.Model getModel()

Specified by:

getModel in interface IModelContainer

Returns:

the RDF model

getDocumentNamespace

public String getDocumentNamespace()

Specified by:

getDocumentNamespace in interface IModelContainer

Returns:

Namespace for document

getElementRefNumber

public static int getElementRefNumber(String elementReference)

Parses out the reference number for an SPDX element reference

Parameters:

elementReference - Element reference to parse

Returns:

element reference or -1 if the element reference is not valid

findElementById

public SpdxElement findElementById(String id)
                            throws InvalidSPDXAnalysisException

Find an element within the container by the SPDX Identifier. Returns null if the element does not exist in the container.

Parameters:

id -

Returns:

Throws:

InvalidSPDXAnalysisException

verifySpdxVersion

public String verifySpdxVersion(String spdxVersion)

getSpdxDocument

public SpdxDocument getSpdxDocument()

Returns:

getNextSpdxElementRef

public String getNextSpdxElementRef()

Specified by:

getNextSpdxElementRef in interface IModelContainer

Returns:

return the next available SPDX element reference.

formSpdxElementRef

public static String formSpdxElementRef(int refNum)

spdxElementRefExists

public boolean spdxElementRefExists(String elementRef)

Description copied from interface: IModelContainer

Returns true if the element reference already exists in the model

Specified by:

spdxElementRefExists in interface IModelContainer

Returns:

addSpdxElementRef

public void addSpdxElementRef(String elementRef)
                       throws InvalidSPDXAnalysisException

Description copied from interface: IModelContainer

Notifies the model container that a new element ref is in use. This must be called for all new element references to prevent duplication of elements.

Specified by:

addSpdxElementRef in interface IModelContainer

Throws:

InvalidSPDXAnalysisException

initializeNextLicenseRef

public void initializeNextLicenseRef()
                              throws InvalidSPDXAnalysisException

Initialize the next license reference and the cache of extracted license infos

Throws:

InvalidSPDXAnalysisException

getNextLicenseRef

public String getNextLicenseRef()

Returns:

next available license ID for an ExtractedLicenseInfo

getLicenseRefNum

public int getLicenseRefNum(String licenseID)
                     throws NonNumericLicenseIdException

Parses a license ID and return the integer representing the ID number (e.g. N in LicenseRef-N) Note that in SPDX 1.2, non-numeric license IDs are allowed. This method will throw a NonNumericException if a non numeric license ID passed as a licenseID parameter

Parameters:

licenseID -

Returns:

Throws:

NonNumericLicenseIdException - If the non-standard license ID is not of the form LicenseRef-NN

formNonStandardLicenseID

public static String formNonStandardLicenseID(int idNum)

addNewExtractedLicenseInfo

public ExtractedLicenseInfo addNewExtractedLicenseInfo(String licenseText)
                                                throws InvalidSPDXAnalysisException

Adds a new non-standard license containing the text provided. Forms the license ID from the next License ID available

Parameters:

licenseText -

Returns:

the newly created NonStandardLicense

Throws:

InvalidSPDXAnalysisException

addNewExtractedLicenseInfo

public void addNewExtractedLicenseInfo(ExtractedLicenseInfo license)
                                throws InvalidSPDXAnalysisException

Adds the license as a new ExtractedLicenseInfo

Parameters:

license -

Throws:

InvalidSPDXAnalysisException

extractedLicenseExists

public boolean extractedLicenseExists(String id)
                               throws InvalidSPDXAnalysisException

Parameters:

id -

Returns:

true if the license ID is already in the model as an extracted license info

Throws:

InvalidSPDXAnalysisException

getExtractedLicense

public ExtractedLicenseInfo getExtractedLicense(String id)
                                         throws InvalidSPDXAnalysisException

Parameters:

id -

Returns:

true if the license ID is already in the model as an extracted license info

Throws:

InvalidSPDXAnalysisException

getExtractedLicenseInfosFromModel

public void getExtractedLicenseInfosFromModel()
                                       throws InvalidSPDXAnalysisException

Get Update the extrated license infos from the model and resynchronize it with the license cache.

Throws:

InvalidSPDXAnalysisException

getExtractedLicenseInfos

public ExtractedLicenseInfo[] getExtractedLicenseInfos()

Returns:

setExtractedLicenseInfos

public void setExtractedLicenseInfos(ExtractedLicenseInfo[] extractedLicenseInfos)
                              throws InvalidSPDXAnalysisException

Parameters:

extractedLicenseInfos -

Throws:

InvalidSPDXAnalysisException

addExtractedLicenseInfos

public void addExtractedLicenseInfos(ExtractedLicenseInfo license)
                              throws InvalidSPDXAnalysisException

Parameters:

license -

Throws:

InvalidSPDXAnalysisException

getFileReferences

public SpdxFile[] getFileReferences()
                             throws InvalidSPDXAnalysisException

get all file references contained within the container

Returns:

Throws:

InvalidSPDXAnalysisException

documentNamespaceToId

public String documentNamespaceToId(String externalNamespace)

Description copied from interface: IModelContainer

Translate an external document namespace URI to an external document ID

Specified by:

documentNamespaceToId in interface IModelContainer

Returns:

externalDocumentIdToNamespace

public String externalDocumentIdToNamespace(String docId)

Description copied from interface: IModelContainer

Translate an external document ID to the external document's namespace

Specified by:

externalDocumentIdToNamespace in interface IModelContainer

Returns:

getExternalDocumentRefs

public ExternalDocumentRef[] getExternalDocumentRefs()

Returns:

external document refs

setExternalDocumentRefs

public void setExternalDocumentRefs(ExternalDocumentRef[] externalDocumentRefs)
                             throws InvalidSPDXAnalysisException

Parameters:

externalDocumentRefs -

Throws:

InvalidSPDXAnalysisException

findAllPackages

public List<SpdxPackage> findAllPackages()
                                  throws InvalidSPDXAnalysisException

Throws:

InvalidSPDXAnalysisException

findAllFiles

public List<SpdxFile> findAllFiles()
                            throws InvalidSPDXAnalysisException

Throws:

InvalidSPDXAnalysisException

addElement

public void addElement(SpdxElement element)
                throws InvalidSPDXAnalysisException

Add an SPDX element directly to the model without connecting it to any properties

Parameters:

element -

Throws:

InvalidSPDXAnalysisException

findAllElements

public List<SpdxElement> findAllElements()
                                  throws InvalidSPDXAnalysisException

Returns all elements in the contains

Returns:

Throws:

InvalidSPDXAnalysisException

createResource

public org.apache.jena.rdf.model.Resource createResource(org.apache.jena.rdf.model.Resource duplicate,
                                                         String uri,
                                                         org.apache.jena.rdf.model.Resource type,
                                                         IRdfModel nodeObject)

Description copied from interface: IModelContainer

Create a resource in the model

Specified by:

createResource in interface IModelContainer

Parameters:

duplicate - A duplicate resource who's node and resource should be returned

uri - If not null, the URI for the resource - if null, an anonomous resource will be used

type - Type of the resource

nodeObject - the object representing this node

Returns:

addCheckNodeObject

public boolean addCheckNodeObject(org.apache.jena.graph.Node node,
                                  IRdfModel nodeObject)

Description copied from interface: IModelContainer

Add a node object to the container. This is for containers which keep track of which object are related to which nodes

Specified by:

addCheckNodeObject in interface IModelContainer

Returns:

true if there are multiple objects for this node

findAllSnippets

public List<SpdxSnippet> findAllSnippets()
                                  throws InvalidSPDXAnalysisException

Returns:

all snippets in the document container

Throws:

InvalidSPDXAnalysisException