edu.cornell.mannlib.vitro.webapp.dao.jena

Class JenaBaseDao

java.lang.Object

edu.cornell.mannlib.vitro.webapp.dao.jena.JenaBaseDaoCon

edu.cornell.mannlib.vitro.webapp.dao.jena.JenaBaseDao

Direct Known Subclasses:

ApplicationDaoJena, DataPropertyStatementDaoJena, DatatypeDaoJena, FauxPropertyDaoJena, IndividualDaoJena, MenuDaoJena, ObjectPropertyStatementDaoJena, OntologyDaoJena, PageDaoJena, PropertyDaoJena, PropertyGroupDaoJena, UserAccountsDaoJena, VClassDaoJena, VClassGroupDaoJena

public class JenaBaseDao
extends JenaBaseDaoCon

Field Summary

Fields

Modifier and Type	Field and Description
protected String	DEFAULT_NAMESPACE
static boolean	KEEP_ONLY_IF_FALSE
static boolean	KEEP_ONLY_IF_TRUE
protected static org.apache.commons.logging.Log	log
protected Set<String>	NONUSER_NAMESPACES
protected List<String>	PREFERRED_LANGUAGES
protected String	PSEUDO_BNODE_NS
protected String	XSD
protected DateFormat	xsdDateFormat
protected DateFormat	xsdDateTimeFormat

Fields inherited from class edu.cornell.mannlib.vitro.webapp.dao.jena.JenaBaseDaoCon

ADDITIONAL_LINK, APPLICATION_ABOUTTEXT, APPLICATION_ACKNOWLEGETEXT, APPLICATION_CONTACTMAIL, APPLICATION_COPYRIGHTANCHOR, APPLICATION_COPYRIGHTURL, APPLICATION_CORRECTIONMAIL, APPLICATION_THEMEDIR, CLASSGROUP, DATAPROPERTY_ISEXTERNALID, DESCRIPTION_ANNOT, DISPLAY_LIMIT, DISPLAY_RANK, DISPLAY_RANK_ANNOT, EDITING, EXAMPLE, EXAMPLE_ANNOT, HIDDEN_FROM_DISPLAY_BELOW_ROLE_LEVEL_ANNOT, HIDDEN_FROM_PUBLISH_BELOW_ROLE_LEVEL_ANNOT, IN_CLASSGROUP, IND_MAIN_IMAGE, LINK, LINK_ANCHOR, LINK_DISPLAYRANK, LINK_TYPE, LINK_URL, MODTIME, MONIKER, ONTOLOGY_PREFIX_ANNOT, PERMISSION, PERMISSION_SET_FOR_NEW_USERS, PERMISSION_SET_FOR_PUBLIC, PERMISSIONSET, PERMISSIONSET_HAS_PERMISSION, PORTAL, PRIMARY_LINK, PROHIBITED_FROM_UPDATE_BELOW_ROLE_LEVEL_ANNOT, PROPERTY_ADDLINKSUPPRESSED, PROPERTY_COLLATEBYSUBCLASSANNOT, PROPERTY_CUSTOM_LIST_VIEW_ANNOT, PROPERTY_CUSTOMDISPLAYVIEWANNOT, PROPERTY_CUSTOMENTRYFORMANNOT, PROPERTY_CUSTOMSEARCHVIEWANNOT, PROPERTY_CUSTOMSHORTVIEWANNOT, PROPERTY_DELETELINKSUPPRESSED, PROPERTY_EDITLINKSUPPRESSED, PROPERTY_ENTITYSORTDIRECTION, PROPERTY_ENTITYSORTFIELD, PROPERTY_FULLPROPERTYNAMEANNOT, PROPERTY_INPROPERTYGROUPANNOT, PROPERTY_OBJECTINDIVIDUALSORTPROPERTY, PROPERTY_OFFERCREATENEWOPTIONANNOT, PROPERTY_SELECTFROMEXISTINGANNOT, PROPERTY_STUBOBJECTPROPERTYANNOT, PROPERTYGROUP, PUBLIC_DESCRIPTION_ANNOT, SEARCH_BOOST_ANNOT, SHORTDEF, USERACCOUNT, USERACCOUNT_ARGON2_PASSWORD, USERACCOUNT_EMAIL_ADDRESS, USERACCOUNT_EMAIL_KEY, USERACCOUNT_EXTERNAL_AUTH_ID, USERACCOUNT_EXTERNAL_AUTH_ONLY, USERACCOUNT_FIRST_NAME, USERACCOUNT_HAS_PERMISSION_SET, USERACCOUNT_LAST_LOGIN_TIME, USERACCOUNT_LAST_NAME, USERACCOUNT_LOGIN_COUNT, USERACCOUNT_MD5_PASSWORD, USERACCOUNT_OLD_PASSWORD, USERACCOUNT_PASSWORD_CHANGE_REQUIRED, USERACCOUNT_PASSWORD_LINK_EXPIRES, USERACCOUNT_PROXY_EDITOR_FOR, USERACCOUNT_ROOT_USER, USERACCOUNT_STATUS, VITRO_PUBLIC_ONTOLOGY

Constructor Summary

Constructors

Constructor and Description
JenaBaseDao(WebappDaoFactoryJena wadf)

Method Summary

Modifier and Type	Method and Description
protected void	addPropertyBooleanValue(org.apache.jena.rdf.model.Resource res, org.apache.jena.rdf.model.Property prop, Boolean value, org.apache.jena.rdf.model.Model model) convenience method
protected void	addPropertyDateTimeValue(org.apache.jena.rdf.model.Resource res, org.apache.jena.rdf.model.Property dataprop, Date value, org.apache.jena.rdf.model.Model model) convenience method
protected void	addPropertyDateValue(org.apache.jena.rdf.model.Resource res, org.apache.jena.ontology.DatatypeProperty dataprop, Date value, org.apache.jena.rdf.model.Model model) convenience method
protected void	addPropertyFloatValue(org.apache.jena.rdf.model.Resource res, org.apache.jena.rdf.model.Property dataprop, Float value, org.apache.jena.rdf.model.Model model) convenience method
protected void	addPropertyIntValue(org.apache.jena.rdf.model.Resource res, org.apache.jena.rdf.model.Property dataprop, int value, org.apache.jena.rdf.model.Model model) convenience method
protected void	addPropertyLongValue(org.apache.jena.rdf.model.Resource res, org.apache.jena.rdf.model.Property dataprop, long value, org.apache.jena.rdf.model.Model model) convenience method
protected void	addPropertyNonNegativeIntValue(org.apache.jena.rdf.model.Resource res, org.apache.jena.rdf.model.Property dataprop, int value, org.apache.jena.rdf.model.Model model) convenience method
protected void	addPropertyResourceURIValue(org.apache.jena.rdf.model.Resource res, org.apache.jena.ontology.ObjectProperty prop, String objectURI) convenience method for use with functional object properties
protected void	addPropertyResourceValue(org.apache.jena.rdf.model.Resource res, org.apache.jena.rdf.model.Property prop, org.apache.jena.rdf.model.Resource objectRes) convenience method for use with functional object properties
protected void	addPropertyStringValue(org.apache.jena.rdf.model.Resource res, org.apache.jena.rdf.model.Property dataprop, String value, org.apache.jena.rdf.model.Model model) convenience method
protected String	checkURI(String uri) Checks a URI for validity.
protected String	getClassURIStr(org.apache.jena.rdf.model.Resource cls)
protected String	getDefaultLanguage()
protected String	getLabel(org.apache.jena.ontology.OntResource r)
protected org.apache.jena.rdf.model.Literal	getLabelLiteral(org.apache.jena.ontology.OntResource r) works through list of PREFERRED_LANGUAGES to find an appropriate label, or NULL if not found.
protected org.apache.jena.rdf.model.Literal	getLabelLiteral(String individualUri)
protected String	getLabelOrId(org.apache.jena.ontology.OntResource r) Get the rdfs:label or vitro:label, working through PERFERED_LANGUAGES, or get local name, bnode Id, or full URI if no labels found.
protected String	getLocalNameOrId(org.apache.jena.ontology.OntResource r) Get the local name, bnode or URI of the resource.
protected BaseResourceBean.RoleLevel	getMostRestrictiveRoleLevel(org.apache.jena.rdf.model.Resource res, org.apache.jena.rdf.model.Property prop)
protected org.apache.jena.ontology.OntClass	getOntClass(org.apache.jena.ontology.OntModel ontModel, String vitroURIStr)
protected org.apache.jena.ontology.OntModel	getOntModel()
protected OntModelSelector	getOntModelSelector()
protected Boolean	getPropertyBooleanValue(org.apache.jena.ontology.OntResource res, org.apache.jena.rdf.model.Property dataprop) convenience method
protected Date	getPropertyDateTimeValue(org.apache.jena.ontology.OntResource res, org.apache.jena.rdf.model.Property dataprop) convenience method
protected Date	getPropertyDateValue(org.apache.jena.ontology.OntResource res, org.apache.jena.ontology.DatatypeProperty dataprop) convenience method
protected Float	getPropertyFloatValue(org.apache.jena.ontology.OntResource res, org.apache.jena.rdf.model.Property prop)
protected int	getPropertyIntValue(org.apache.jena.ontology.OntResource res, org.apache.jena.rdf.model.Property dataprop) convenience method
protected long	getPropertyLongValue(org.apache.jena.ontology.OntResource res, org.apache.jena.rdf.model.Property dataprop) convenience method
protected Integer	getPropertyNonNegativeIntegerValue(org.apache.jena.ontology.OntResource res, org.apache.jena.rdf.model.Property dataprop) convenience method
protected int	getPropertyNonNegativeIntValue(org.apache.jena.ontology.OntResource res, org.apache.jena.rdf.model.Property dataprop) convenience method
protected Collection<String>	getPropertyResourceURIValues(org.apache.jena.rdf.model.Resource res, org.apache.jena.ontology.ObjectProperty prop) convenience method for use with functional object properties
protected String	getPropertyStringValue(org.apache.jena.ontology.OntResource res, org.apache.jena.rdf.model.Property dataprop) convenience method
protected org.apache.jena.rdf.model.Model[]	getSmartRemoval(org.apache.jena.ontology.OntResource ontRes, org.apache.jena.ontology.OntModel ontModel) Returns additions and retractions to perform
protected WebappDaoFactoryJena	getWebappDaoFactory()
protected List<org.apache.jena.ontology.OntModel>	getWritableOntModelList()
boolean	isBooleanClassExpression(org.apache.jena.ontology.OntClass cls)
protected List<org.apache.jena.rdf.model.Resource>	listDirectObjectPropertySubjects(org.apache.jena.rdf.model.Resource value, org.apache.jena.rdf.model.Property prop)
protected List<org.apache.jena.rdf.model.Resource>	listDirectObjectPropertyValues(org.apache.jena.rdf.model.Resource subj, org.apache.jena.rdf.model.Property prop)
protected org.apache.jena.graph.Node	makeNodeForURI(String vitroURIStr)
void	removeRulesMentioningResource(org.apache.jena.rdf.model.Resource res, org.apache.jena.ontology.OntModel ontModel)
protected void	smartRemove(org.apache.jena.ontology.OntResource ontRes, org.apache.jena.ontology.OntModel ontModel)
protected org.apache.jena.rdf.model.Literal	tryLiteralForPreferredLanguages(List<org.apache.jena.rdf.model.Literal> labels) Searches for literal in preferred language.
protected void	updatePlainLiteralValue(org.apache.jena.ontology.OntResource ontRes, org.apache.jena.rdf.model.Property property, String lexicalForm) Add to an OntResource a Property value with lexical form and default language tag.
protected void	updatePlainLiteralValue(org.apache.jena.ontology.OntResource ontRes, org.apache.jena.rdf.model.Property property, String lexicalForm, String lang) Add to an OntResource a Property value with lexical form and optional language tag.
protected void	updatePropertyBooleanValue(org.apache.jena.rdf.model.Resource res, org.apache.jena.rdf.model.Property dataprop, Boolean value, org.apache.jena.rdf.model.Model model, boolean keepOnlyIfTrue) Convenience method for use with functional datatype properties.
protected void	updatePropertyDateTimeValue(org.apache.jena.rdf.model.Resource res, org.apache.jena.rdf.model.Property dataprop, Date value, org.apache.jena.rdf.model.Model model) convenience method for use with functional datatype properties
protected void	updatePropertyDateValue(org.apache.jena.rdf.model.Resource res, org.apache.jena.ontology.DatatypeProperty dataprop, Date value, org.apache.jena.rdf.model.Model model) convenience method for use with functional datatype properties
protected void	updatePropertyFloatValue(org.apache.jena.rdf.model.Resource res, org.apache.jena.rdf.model.Property dataprop, Float value, org.apache.jena.rdf.model.Model model) convenience method for use with functional properties
protected void	updatePropertyIntValue(org.apache.jena.rdf.model.Resource res, org.apache.jena.rdf.model.Property dataprop, int value, org.apache.jena.rdf.model.Model model) convenience method for use with functional datatype properties
protected void	updatePropertyLongValue(org.apache.jena.rdf.model.Resource res, org.apache.jena.rdf.model.Property dataprop, Long value, org.apache.jena.rdf.model.Model model) convenience method for use with functional datatype properties
protected void	updatePropertyNonNegativeIntegerValue(org.apache.jena.rdf.model.Resource res, org.apache.jena.rdf.model.Property dataprop, Integer value, org.apache.jena.rdf.model.Model model) convenience method for use with functional datatype properties
protected void	updatePropertyNonNegativeIntValue(org.apache.jena.rdf.model.Resource res, org.apache.jena.rdf.model.Property dataprop, int value, org.apache.jena.rdf.model.Model model) convenience method for use with functional datatype properties
protected void	updatePropertyResourceURIValue(org.apache.jena.rdf.model.Resource res, org.apache.jena.rdf.model.Property prop, String objectURI) convenience method for use with functional properties
protected void	updatePropertyResourceURIValue(org.apache.jena.rdf.model.Resource res, org.apache.jena.rdf.model.Property prop, String uri, org.apache.jena.rdf.model.Model model) convenience method for use with functional properties
protected void	updatePropertyResourceURIValues(org.apache.jena.rdf.model.Resource res, org.apache.jena.rdf.model.Property prop, Collection<String> uris, org.apache.jena.rdf.model.Model model) convenience method to update the value(s) of a one-to-many object property NOTE: this should be run from within a CriticalSection(WRITE)
protected void	updatePropertyResourceValue(org.apache.jena.rdf.model.Resource res, org.apache.jena.rdf.model.Property prop, org.apache.jena.rdf.model.Resource objectRes) convenience method for use with functional properties
protected void	updatePropertyResourceValue(org.apache.jena.rdf.model.Resource res, org.apache.jena.rdf.model.Property prop, org.apache.jena.rdf.model.Resource objectRes, org.apache.jena.rdf.model.Model model) convenience method for use with functional properties
protected void	updatePropertyStringValue(org.apache.jena.rdf.model.Resource res, org.apache.jena.rdf.model.Property dataprop, String value, org.apache.jena.rdf.model.Model model) convenience method for use with functional datatype properties
protected void	updateRDFSLabel(org.apache.jena.ontology.OntResource ontRes, String lexicalForm) Add to an OntResource an rdfs:label value with lexical form and default language tag.
protected void	updateRDFSLabel(org.apache.jena.ontology.OntResource ontRes, String lexicalForm, String lang) Add to an OntResource an rdfs:label value with lexical form and optional language tag.

Methods inherited from class edu.cornell.mannlib.vitro.webapp.dao.jena.JenaBaseDaoCon

getConstModel

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

KEEP_ONLY_IF_TRUE

public static final boolean KEEP_ONLY_IF_TRUE

See Also:

Constant Field Values

KEEP_ONLY_IF_FALSE

public static final boolean KEEP_ONLY_IF_FALSE

See Also:

Constant Field Values

log

protected static final org.apache.commons.logging.Log log

PSEUDO_BNODE_NS

protected String PSEUDO_BNODE_NS

XSD

protected String XSD

xsdDateFormat

protected DateFormat xsdDateFormat

xsdDateTimeFormat

protected DateFormat xsdDateTimeFormat

DEFAULT_NAMESPACE

protected String DEFAULT_NAMESPACE

NONUSER_NAMESPACES

protected Set<String> NONUSER_NAMESPACES

PREFERRED_LANGUAGES

protected List<String> PREFERRED_LANGUAGES

Constructor Detail

JenaBaseDao

public JenaBaseDao(WebappDaoFactoryJena wadf)

Method Detail

getOntModel

protected org.apache.jena.ontology.OntModel getOntModel()

getOntModelSelector

protected OntModelSelector getOntModelSelector()

getWritableOntModelList

protected List<org.apache.jena.ontology.OntModel> getWritableOntModelList()

getWebappDaoFactory

protected WebappDaoFactoryJena getWebappDaoFactory()

getPropertyStringValue

protected String getPropertyStringValue(org.apache.jena.ontology.OntResource res,
                                        org.apache.jena.rdf.model.Property dataprop)

convenience method

addPropertyStringValue

protected void addPropertyStringValue(org.apache.jena.rdf.model.Resource res,
                                      org.apache.jena.rdf.model.Property dataprop,
                                      String value,
                                      org.apache.jena.rdf.model.Model model)

convenience method

getPropertyBooleanValue

protected Boolean getPropertyBooleanValue(org.apache.jena.ontology.OntResource res,
                                          org.apache.jena.rdf.model.Property dataprop)

convenience method

addPropertyBooleanValue

protected void addPropertyBooleanValue(org.apache.jena.rdf.model.Resource res,
                                       org.apache.jena.rdf.model.Property prop,
                                       Boolean value,
                                       org.apache.jena.rdf.model.Model model)

convenience method

updatePropertyStringValue

protected void updatePropertyStringValue(org.apache.jena.rdf.model.Resource res,
                                         org.apache.jena.rdf.model.Property dataprop,
                                         String value,
                                         org.apache.jena.rdf.model.Model model)

convenience method for use with functional datatype properties

updatePropertyBooleanValue

protected void updatePropertyBooleanValue(org.apache.jena.rdf.model.Resource res,
                                          org.apache.jena.rdf.model.Property dataprop,
                                          Boolean value,
                                          org.apache.jena.rdf.model.Model model,
                                          boolean keepOnlyIfTrue)

Convenience method for use with functional datatype properties. Pass keepOnlyIfTrue if a lack of a value in the model indicates false. See ObjectPropertyDaoJena and PROPERTY_OFFERCREATENEWOPTIONANNOT for an example.

getPropertyNonNegativeIntValue

protected int getPropertyNonNegativeIntValue(org.apache.jena.ontology.OntResource res,
                                             org.apache.jena.rdf.model.Property dataprop)

convenience method

getPropertyNonNegativeIntegerValue

protected Integer getPropertyNonNegativeIntegerValue(org.apache.jena.ontology.OntResource res,
                                                     org.apache.jena.rdf.model.Property dataprop)

convenience method

addPropertyIntValue

protected void addPropertyIntValue(org.apache.jena.rdf.model.Resource res,
                                   org.apache.jena.rdf.model.Property dataprop,
                                   int value,
                                   org.apache.jena.rdf.model.Model model)

convenience method

addPropertyLongValue

protected void addPropertyLongValue(org.apache.jena.rdf.model.Resource res,
                                    org.apache.jena.rdf.model.Property dataprop,
                                    long value,
                                    org.apache.jena.rdf.model.Model model)

convenience method

updatePropertyIntValue

protected void updatePropertyIntValue(org.apache.jena.rdf.model.Resource res,
                                      org.apache.jena.rdf.model.Property dataprop,
                                      int value,
                                      org.apache.jena.rdf.model.Model model)

convenience method for use with functional datatype properties

getPropertyIntValue

protected int getPropertyIntValue(org.apache.jena.ontology.OntResource res,
                                  org.apache.jena.rdf.model.Property dataprop)

convenience method

addPropertyNonNegativeIntValue

protected void addPropertyNonNegativeIntValue(org.apache.jena.rdf.model.Resource res,
                                              org.apache.jena.rdf.model.Property dataprop,
                                              int value,
                                              org.apache.jena.rdf.model.Model model)

convenience method

updatePropertyNonNegativeIntValue

protected void updatePropertyNonNegativeIntValue(org.apache.jena.rdf.model.Resource res,
                                                 org.apache.jena.rdf.model.Property dataprop,
                                                 int value,
                                                 org.apache.jena.rdf.model.Model model)

convenience method for use with functional datatype properties

updatePropertyNonNegativeIntegerValue

protected void updatePropertyNonNegativeIntegerValue(org.apache.jena.rdf.model.Resource res,
                                                     org.apache.jena.rdf.model.Property dataprop,
                                                     Integer value,
                                                     org.apache.jena.rdf.model.Model model)

convenience method for use with functional datatype properties

updatePropertyLongValue

protected void updatePropertyLongValue(org.apache.jena.rdf.model.Resource res,
                                       org.apache.jena.rdf.model.Property dataprop,
                                       Long value,
                                       org.apache.jena.rdf.model.Model model)

convenience method for use with functional datatype properties

getPropertyLongValue

protected long getPropertyLongValue(org.apache.jena.ontology.OntResource res,
                                    org.apache.jena.rdf.model.Property dataprop)

convenience method

addPropertyFloatValue

protected void addPropertyFloatValue(org.apache.jena.rdf.model.Resource res,
                                     org.apache.jena.rdf.model.Property dataprop,
                                     Float value,
                                     org.apache.jena.rdf.model.Model model)

convenience method

updatePropertyFloatValue

protected void updatePropertyFloatValue(org.apache.jena.rdf.model.Resource res,
                                        org.apache.jena.rdf.model.Property dataprop,
                                        Float value,
                                        org.apache.jena.rdf.model.Model model)

convenience method for use with functional properties

getPropertyFloatValue

protected Float getPropertyFloatValue(org.apache.jena.ontology.OntResource res,
                                      org.apache.jena.rdf.model.Property prop)

getPropertyDateValue

protected Date getPropertyDateValue(org.apache.jena.ontology.OntResource res,
                                    org.apache.jena.ontology.DatatypeProperty dataprop)

convenience method

addPropertyDateValue

protected void addPropertyDateValue(org.apache.jena.rdf.model.Resource res,
                                    org.apache.jena.ontology.DatatypeProperty dataprop,
                                    Date value,
                                    org.apache.jena.rdf.model.Model model)

convenience method

Parameters:

res - Resource

dataprop - Datatype property

value - Date

model - Jena Model

updatePropertyDateValue

protected void updatePropertyDateValue(org.apache.jena.rdf.model.Resource res,
                                       org.apache.jena.ontology.DatatypeProperty dataprop,
                                       Date value,
                                       org.apache.jena.rdf.model.Model model)

convenience method for use with functional datatype properties

getPropertyDateTimeValue

protected Date getPropertyDateTimeValue(org.apache.jena.ontology.OntResource res,
                                        org.apache.jena.rdf.model.Property dataprop)

convenience method

addPropertyDateTimeValue

protected void addPropertyDateTimeValue(org.apache.jena.rdf.model.Resource res,
                                        org.apache.jena.rdf.model.Property dataprop,
                                        Date value,
                                        org.apache.jena.rdf.model.Model model)

convenience method

updatePropertyDateTimeValue

protected void updatePropertyDateTimeValue(org.apache.jena.rdf.model.Resource res,
                                           org.apache.jena.rdf.model.Property dataprop,
                                           Date value,
                                           org.apache.jena.rdf.model.Model model)

convenience method for use with functional datatype properties

getPropertyResourceURIValues

protected Collection<String> getPropertyResourceURIValues(org.apache.jena.rdf.model.Resource res,
                                                          org.apache.jena.ontology.ObjectProperty prop)

convenience method for use with functional object properties

getMostRestrictiveRoleLevel

protected BaseResourceBean.RoleLevel getMostRestrictiveRoleLevel(org.apache.jena.rdf.model.Resource res,
                                                                 org.apache.jena.rdf.model.Property prop)

addPropertyResourceURIValue

protected void addPropertyResourceURIValue(org.apache.jena.rdf.model.Resource res,
                                           org.apache.jena.ontology.ObjectProperty prop,
                                           String objectURI)

convenience method for use with functional object properties

updatePropertyResourceURIValue

protected void updatePropertyResourceURIValue(org.apache.jena.rdf.model.Resource res,
                                              org.apache.jena.rdf.model.Property prop,
                                              String objectURI)

convenience method for use with functional properties

updatePropertyResourceURIValue

protected void updatePropertyResourceURIValue(org.apache.jena.rdf.model.Resource res,
                                              org.apache.jena.rdf.model.Property prop,
                                              String uri,
                                              org.apache.jena.rdf.model.Model model)

convenience method for use with functional properties

addPropertyResourceValue

protected void addPropertyResourceValue(org.apache.jena.rdf.model.Resource res,
                                        org.apache.jena.rdf.model.Property prop,
                                        org.apache.jena.rdf.model.Resource objectRes)

convenience method for use with functional object properties

updatePropertyResourceValue

protected void updatePropertyResourceValue(org.apache.jena.rdf.model.Resource res,
                                           org.apache.jena.rdf.model.Property prop,
                                           org.apache.jena.rdf.model.Resource objectRes)

convenience method for use with functional properties

updatePropertyResourceValue

protected void updatePropertyResourceValue(org.apache.jena.rdf.model.Resource res,
                                           org.apache.jena.rdf.model.Property prop,
                                           org.apache.jena.rdf.model.Resource objectRes,
                                           org.apache.jena.rdf.model.Model model)

convenience method for use with functional properties

updatePropertyResourceURIValues

protected void updatePropertyResourceURIValues(org.apache.jena.rdf.model.Resource res,
                                               org.apache.jena.rdf.model.Property prop,
                                               Collection<String> uris,
                                               org.apache.jena.rdf.model.Model model)

convenience method to update the value(s) of a one-to-many object property NOTE: this should be run from within a CriticalSection(WRITE)

updateRDFSLabel

protected void updateRDFSLabel(org.apache.jena.ontology.OntResource ontRes,
                               String lexicalForm)

Add to an OntResource an rdfs:label value with lexical form and default language tag. Remove any other existing values in default language. If lexicalForm parameter is null, remove all plain literal values of Property in default language.

Parameters:

ontRes - may not be null

lexicalForm - may be null. If null, existing values will be deleted but none will be added.

updateRDFSLabel

protected void updateRDFSLabel(org.apache.jena.ontology.OntResource ontRes,
                               String lexicalForm,
                               String lang)

Add to an OntResource an rdfs:label value with lexical form and optional language tag. Remove any other existing plain literal values that match specified language or lack language tags if no language is supplied. If lexicalForm parameter is null, remove all plain literal labels in specified language, or all existing language-less labels if no language is specified.

Parameters:

ontRes - may not be null

lexicalForm - may be null. If null, existing values will be deleted but none will be added.

lang - may be null. If null, method acts on language-less plain literal labels and ignores those with language tags.

updatePlainLiteralValue

protected void updatePlainLiteralValue(org.apache.jena.ontology.OntResource ontRes,
                                       org.apache.jena.rdf.model.Property property,
                                       String lexicalForm)

Add to an OntResource a Property value with lexical form and default language tag. Remove any other existing values in default language. If lexicalForm parameter is null, remove all plain literal values of Property in default language.

Parameters:

ontRes - may not be null

lexicalForm - may be null. If null, existing values will be deleted but none will be added.

updatePlainLiteralValue

protected void updatePlainLiteralValue(org.apache.jena.ontology.OntResource ontRes,
                                       org.apache.jena.rdf.model.Property property,
                                       String lexicalForm,
                                       String lang)

Add to an OntResource a Property value with lexical form and optional language tag. Remove any other existing plain literal values that match specified language or lack language tags if no language is supplied. If lexicalForm parameter is null, remove all plain literal values of Property in specified language, or all existing language-less literals if no language is specified.

Parameters:

ontRes - may not be null

lexicalForm - may be null. If null, existing values will be deleted but none will be added.

lang - may be null. If null, method acts on language-less plain literal values and ignores those with language tags.

getLabelOrId

protected String getLabelOrId(org.apache.jena.ontology.OntResource r)

Get the rdfs:label or vitro:label, working through PERFERED_LANGUAGES, or get local name, bnode Id, or full URI if no labels found.

getLabel

protected String getLabel(org.apache.jena.ontology.OntResource r)

getLabelLiteral

protected org.apache.jena.rdf.model.Literal getLabelLiteral(String individualUri)

getLabelLiteral

protected org.apache.jena.rdf.model.Literal getLabelLiteral(org.apache.jena.ontology.OntResource r)

works through list of PREFERRED_LANGUAGES to find an appropriate label, or NULL if not found.

getLocalNameOrId

protected String getLocalNameOrId(org.apache.jena.ontology.OntResource r)

Get the local name, bnode or URI of the resource.

tryLiteralForPreferredLanguages

protected org.apache.jena.rdf.model.Literal tryLiteralForPreferredLanguages(List<org.apache.jena.rdf.model.Literal> labels)

Searches for literal in preferred language.

Parameters:

labels - the literals to search; must not be null

Returns:

the literal in preferred language if its containing in given list; otherwise the first entry will returned; returns null if an empty list was given

getDefaultLanguage

protected String getDefaultLanguage()

checkURI

protected String checkURI(String uri)

Checks a URI for validity. Jena models can store invalid URIs, but this causes RDF/XML output serialization to fail.

Parameters:

uri - URI

Returns:

null if URI is good, otherwise an error message String

isBooleanClassExpression

public boolean isBooleanClassExpression(org.apache.jena.ontology.OntClass cls)

getOntClass

protected org.apache.jena.ontology.OntClass getOntClass(org.apache.jena.ontology.OntModel ontModel,
                                                        String vitroURIStr)

getClassURIStr

protected String getClassURIStr(org.apache.jena.rdf.model.Resource cls)

makeNodeForURI

protected org.apache.jena.graph.Node makeNodeForURI(String vitroURIStr)

listDirectObjectPropertyValues

protected List<org.apache.jena.rdf.model.Resource> listDirectObjectPropertyValues(org.apache.jena.rdf.model.Resource subj,
                                                                                  org.apache.jena.rdf.model.Property prop)

listDirectObjectPropertySubjects

protected List<org.apache.jena.rdf.model.Resource> listDirectObjectPropertySubjects(org.apache.jena.rdf.model.Resource value,
                                                                                    org.apache.jena.rdf.model.Property prop)

getSmartRemoval

protected org.apache.jena.rdf.model.Model[] getSmartRemoval(org.apache.jena.ontology.OntResource ontRes,
                                                            org.apache.jena.ontology.OntModel ontModel)

Returns additions and retractions to perform

Parameters:

ontRes - Ontology resource

ontModel - Ontology model

Returns:

Model[] where [0] is retractions and [1] is additions

smartRemove

protected void smartRemove(org.apache.jena.ontology.OntResource ontRes,
                           org.apache.jena.ontology.OntModel ontModel)

removeRulesMentioningResource

public void removeRulesMentioningResource(org.apache.jena.rdf.model.Resource res,
                                          org.apache.jena.ontology.OntModel ontModel)