edu.cornell.mannlib.semservices.service.impl

Class UMLSService

java.lang.Object

edu.cornell.mannlib.semservices.service.impl.UMLSService

All Implemented Interfaces:

edu.cornell.mannlib.semservices.service.ExternalConceptService

public class UMLSService
extends Object
implements edu.cornell.mannlib.semservices.service.ExternalConceptService

Author:

jaf30

Field Summary

Fields

Modifier and Type	Field and Description
protected org.apache.commons.logging.Log	logger

Constructor Summary

Constructors

Constructor and Description
UMLSService()

Method Summary

Modifier and Type	Method and Description
static boolean	configurationFileExists()
List<edu.cornell.mannlib.semservices.bo.Concept>	getConcepts(String term)
List<edu.cornell.mannlib.semservices.bo.Concept>	getConceptsByURIWithSparql(String uri)
protected String	getJsonValue(com.fasterxml.jackson.databind.node.ObjectNode obj, String key) Get a string from a json object or an empty string if there is no value for the given key
boolean	isConfigured()
List<edu.cornell.mannlib.semservices.bo.Concept>	processResults(String term)
protected String	stripConceptId(String uri)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

logger

protected final org.apache.commons.logging.Log logger

Constructor Detail

UMLSService

public UMLSService()

Method Detail

configurationFileExists

public static boolean configurationFileExists()

isConfigured

public boolean isConfigured()

getConcepts

public List<edu.cornell.mannlib.semservices.bo.Concept> getConcepts(String term)
                                                             throws Exception

Specified by:

getConcepts in interface edu.cornell.mannlib.semservices.service.ExternalConceptService

Throws:

Exception

processResults

public List<edu.cornell.mannlib.semservices.bo.Concept> processResults(String term)
                                                                throws Exception

Specified by:

processResults in interface edu.cornell.mannlib.semservices.service.ExternalConceptService

Throws:

Exception

getConceptsByURIWithSparql

public List<edu.cornell.mannlib.semservices.bo.Concept> getConceptsByURIWithSparql(String uri)
                                                                            throws Exception

Specified by:

getConceptsByURIWithSparql in interface edu.cornell.mannlib.semservices.service.ExternalConceptService

Parameters:

uri - URI

Throws:

Exception

getJsonValue

protected String getJsonValue(com.fasterxml.jackson.databind.node.ObjectNode obj,
                              String key)

Get a string from a json object or an empty string if there is no value for the given key

Parameters:

obj - JSON Object

key - Key to retrieve

stripConceptId

protected String stripConceptId(String uri)