A B C D E F G H I J L M N O P Q R S T U V W X Y

A

AboutQrCodesController - Class in edu.cornell.mannlib.vitro.webapp.controller

AboutQrCodesController() - Constructor for class edu.cornell.mannlib.vitro.webapp.controller.AboutQrCodesController

ACADEMIC_FACULTY_EMPLOYEE_URL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

ACADEMIC_STAFF_EMPLOYEE_URL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

Activity - Class in edu.cornell.mannlib.vitro.webapp.visualization.valueobjects

This interface will make sure that VOs conveying any person's academic output like publications, grants etc implement certain methods which will be used to generalize methods which are just interested in certain common properties like what was the year in which the activity was published (or started).

Activity(String) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Activity

addActivities(Collection<Activity>) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SubEntity

addActivity(Activity) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Collaboration

addActivity(Activity) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Collaborator

addActivity(Activity) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SubEntity

AddAssociatedConceptGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

Generates the edit configuration for importing concepts from external search services, e.g.

AddAssociatedConceptGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAssociatedConceptGenerator

AddAssociatedConceptGenerator.AssociatedConceptInfo - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

AddAssociatedConceptGenerator.AssociatedConceptInfoComparator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

AddAssociatedConceptsPreprocessor - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors

AddAssociatedConceptsPreprocessor(EditConfigurationVTwo) - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.AddAssociatedConceptsPreprocessor

AddAttendeeRoleToPersonGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

AddAttendeeRoleToPersonGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAttendeeRoleToPersonGenerator

AddAuthorsToInformationResourceGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

This is a slightly unusual generator that is used by Manage Authors on information resources.

AddAuthorsToInformationResourceGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAuthorsToInformationResourceGenerator

AddAuthorsToInformationResourceGenerator.AuthorshipInfo - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

AddClinicalRoleToPersonGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

AddClinicalRoleToPersonGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddClinicalRoleToPersonGenerator

AddConceptThroughObjectPropertyGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

This generator is for the case where a new concept is being added for an object property other than research/subject areas where the default object property form generator would work instead of the generator for managing concepts.

AddConceptThroughObjectPropertyGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddConceptThroughObjectPropertyGenerator

addContextNodeClass(String) - Method in class edu.cornell.mannlib.vitro.webapp.searchindex.extensions.LabelsAcrossContextNodes

AddEditorRoleToPersonGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

Generates the edit configuration for adding a Role to a Person.

AddEditorRoleToPersonGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditorRoleToPersonGenerator

AddEditorshipToPersonGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

AddEditorshipToPersonGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditorshipToPersonGenerator

AddEditorsToInformationResourceGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

This is a slightly unusual generator that is used by Manage Editors on information resources.

AddEditorsToInformationResourceGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditorsToInformationResourceGenerator

AddEditorsToInformationResourceGenerator.EditorshipInfo - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

AddEditWebpageFormGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

Custom form for adding or editing a webpage associated with an individual.

AddEditWebpageFormGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditWebpageFormGenerator

addEntityTypeLabel(String) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SubEntity

addEntry(String, String) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.GenericQueryMap

addFormSpecificData(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAssociatedConceptGenerator

addFormSpecificData(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAuthorsToInformationResourceGenerator

addFormSpecificData(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditorshipToPersonGenerator

addFormSpecificData(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditorsToInformationResourceGenerator

addFormSpecificData(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

addFormSpecificData(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddPublicationToPersonGenerator

addFormSpecificData(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddRoleToPersonTwoStageGenerator

addFormSpecificData(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddUserDefinedConceptGenerator

addFormSpecificData(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AutocompleteDataPropertyFormGenerator

addFormSpecificData(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.GrantHasContributorGenerator

addFormSpecificData(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.OrganizationForTrainingGenerator

addFormSpecificData(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasAdviseeRelationshipGenerator

addFormSpecificData(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasAdvisorRelationshipGenerator

addFormSpecificData(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasEducationalTraining

addFormSpecificData(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasIssuedCredentialGenerator

addFormSpecificData(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasPositionHistoryGenerator

addFormSpecificData(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ProjectHasParticipantGenerator

addFormSpecificData(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.VIVODefaultAddMissingIndividualFormGenerator

addFormSpecificData(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.VIVONewIndividualFormGenerator

AddFullNameToPersonGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

AddFullNameToPersonGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddFullNameToPersonGenerator

AddGrantRoleToPersonGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

Custom form for adding a grant to an person for the predicates hasCo-PrincipalInvestigatorRole and hasPrincipalInvestigatorRole.

AddGrantRoleToPersonGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

AddGrantRoleToPersonGenerator.RoleActivityOptionTypes - Enum in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

AddHeadOfRoleToPersonGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

AddHeadOfRoleToPersonGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddHeadOfRoleToPersonGenerator

AddMemberRoleToPersonGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

AddMemberRoleToPersonGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddMemberRoleToPersonGenerator

AddOrcidIdToPersonGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

AddOrcidIdToPersonGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddOrcidIdToPersonGenerator

AddOrganizerRoleToPersonGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

AddOrganizerRoleToPersonGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddOrganizerRoleToPersonGenerator

AddOutreachProviderRoleToPersonGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

AddOutreachProviderRoleToPersonGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddOutreachProviderRoleToPersonGenerator

addParents(Collection<Individual>) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Entity

AddPresenterRoleToPersonGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

AddPresenterRoleToPersonGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddPresenterRoleToPersonGenerator

AddPublicationToPersonGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

On an add/new, this will show a form, on an edit/update this will skip to the profile page of the publication.

AddPublicationToPersonGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddPublicationToPersonGenerator

AddResearcherRoleToPersonGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

AddResearcherRoleToPersonGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddResearcherRoleToPersonGenerator

AddReviewerRoleToPersonGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

AddReviewerRoleToPersonGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddReviewerRoleToPersonGenerator

AddRoleToPersonTwoStageGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

Generates the edit configuration for adding a Role to a Person.

AddRoleToPersonTwoStageGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddRoleToPersonTwoStageGenerator

AddRoleToPersonTwoStageGenerator.RoleActivityOptionTypes - Enum in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

AddServiceProviderRoleToPersonGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

AddServiceProviderRoleToPersonGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddServiceProviderRoleToPersonGenerator

addSubEntitities(Collection<SubEntity>) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Entity

addSubEntity(SubEntity) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Entity

addSubEntity(String, String, String, int) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.MapOfScience

AddTeacherRoleToPersonGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

AddTeacherRoleToPersonGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddTeacherRoleToPersonGenerator

addTypeRestriction(String) - Method in class edu.cornell.mannlib.vitro.webapp.searchindex.extensions.LabelsAcrossContextNodes

AddUserDefinedConceptGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

Generates the edit configuration for importing concepts from external search services, e.g.

AddUserDefinedConceptGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddUserDefinedConceptGenerator

AdvisingRelationshipChecker - Class in edu.cornell.mannlib.vivo.auth.policy

Does the requested action involve a change to an Advising Relationship that the self-editor is authorized to modify?

AdvisingRelationshipChecker(AbstractPropertyStatementAction) - Constructor for class edu.cornell.mannlib.vivo.auth.policy.AdvisingRelationshipChecker

Affinity() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.utilities.CachingRDFServiceExecutor.Affinity

AgrovocService - Class in edu.cornell.mannlib.semservices.service.impl

AgrovocService() - Constructor for class edu.cornell.mannlib.semservices.service.impl.AgrovocService

AJAX_VISUALIZATION_SERVICE_URL_PREFIX - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

AjaxVisualizationController - Class in edu.cornell.mannlib.vitro.webapp.controller.visualization

Services a visualization request.

AjaxVisualizationController() - Constructor for class edu.cornell.mannlib.vitro.webapp.controller.visualization.AjaxVisualizationController

AllPropertiesQueryRunner - Class in edu.cornell.mannlib.vitro.webapp.visualization.visutils

This query runner is used to execute a sparql query that will fetch all the properties available for the provided individual URI.

AllPropertiesQueryRunner(String, String, RDFService, Log) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.visutils.AllPropertiesQueryRunner

ARE_GRANTS_AVAILABLE_UTILS_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

ARE_PUBLICATIONS_AVAILABLE_UTILS_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

AssociatedConceptInfo(String, String, String, String, String, String, String) - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAssociatedConceptGenerator.AssociatedConceptInfo

AssociatedConceptInfoComparator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAssociatedConceptGenerator.AssociatedConceptInfoComparator

auth - Variable in class edu.cornell.mannlib.vivo.orcid.controller.OrcidAbstractHandler

AUTHOR_LABEL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

AUTHOR_URL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

AuthorshipInfo(String, String, String, String) - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAuthorsToInformationResourceGenerator.AuthorshipInfo

AutocompleteDataPropertyFormGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

Generates the edit configuration for a default property form.

AutocompleteDataPropertyFormGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AutocompleteDataPropertyFormGenerator

AutocompleteRequiredInputValidator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing

AutocompleteRequiredInputValidator(String, String) - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.AutocompleteRequiredInputValidator

B

BaseObject - Class in edu.cornell.mannlib.semservices.bo

BaseObject() - Constructor for class edu.cornell.mannlib.semservices.bo.BaseObject

build(RDFService) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.CachingRDFServiceExecutor

(Re)build the current cache

build(Individual, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.web.templatemodels.individual.VIVOIndividualTemplateModelBuilder

build(Individual, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.web.templatemodels.individuallist.VIVOListedIndividualBuilder

buildMissing() - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.VisualizationCaches

C

CachedModelConstructor - Interface in edu.cornell.mannlib.vitro.webapp.visualization.visutils

cachedWhen() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.CachingRDFServiceExecutor

CachingRDFServiceExecutor<T> - Class in edu.cornell.mannlib.vitro.webapp.visualization.utilities

Utilicy class that populates and returns a cache.

CachingRDFServiceExecutor(CachingRDFServiceExecutor.RDFServiceCallable<T>) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.utilities.CachingRDFServiceExecutor

CachingRDFServiceExecutor.Affinity - Class in edu.cornell.mannlib.vitro.webapp.visualization.utilities

Affinity class that serializes background processing for tasks given the same affinity

CachingRDFServiceExecutor.RDFServiceCallable<T> - Class in edu.cornell.mannlib.vitro.webapp.visualization.utilities

Class to be implemented by user to provide the means of generating the results

calculateBeta(String) - Method in class edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.CalculateParameters

CalculateParameters - Class in edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding

CalculateParameters() - Constructor for class edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.CalculateParameters

call() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.CachingRDFServiceExecutor.RDFServiceCallable

Entry point for the background threads, ensuring the right start / cleanup is done

callWithService(RDFService) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.CachingRDFServiceExecutor.RDFServiceCallable

Method for users to implement, to return the results

CapabilityMapRequestHandler - Class in edu.cornell.mannlib.vitro.webapp.visualization.capabilitymap

CapabilityMapRequestHandler() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.capabilitymap.CapabilityMapRequestHandler

CO_AUTHOR_LABEL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

CO_AUTHOR_URL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

CO_PI_LABEL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

CO_PI_URL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

CO_PI_VIS - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

COAUTHOR_NETWORK_DOWNLOAD_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

COAUTHOR_NETWORK_STREAM_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

COAUTHOR_UTILS_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

COAUTHOR_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

COAUTHORS_COUNT_PER_YEAR_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

COAUTHORS_LIST_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

COAUTHORSHIP_VIS - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

COAUTHORSHIP_VIS_SHORT_URL - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

CoAuthorshipData - Class in edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils

CoAuthorshipData(Collaborator, Set<Collaborator>, Set<Collaboration>, Map<String, Activity>) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils.CoAuthorshipData

CoAuthorshipGraphMLWriter - Class in edu.cornell.mannlib.vitro.webapp.visualization.coauthorship

CoAuthorshipGraphMLWriter(CollaborationData) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.coauthorship.CoAuthorshipGraphMLWriter

CoAuthorshipQueryRunner - Class in edu.cornell.mannlib.vitro.webapp.visualization.coauthorship

This query runner is used to execute a sparql query to get all the publications for a particular individual.

CoAuthorshipQueryRunner(String, VitroRequest, Log) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.coauthorship.CoAuthorshipQueryRunner

CoAuthorshipRequestHandler - Class in edu.cornell.mannlib.vitro.webapp.visualization.coauthorship

This request handler is used when information related to co-authorship network for an individual is requested.

CoAuthorshipRequestHandler() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.coauthorship.CoAuthorshipRequestHandler

CoAuthorshipVisCodeGenerator - Class in edu.cornell.mannlib.vitro.webapp.visualization.coauthorship

CoAuthorshipVisCodeGenerator(String, String, String, Map<String, Set<Collaborator>>, Log) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.coauthorship.CoAuthorshipVisCodeGenerator

coAuthorVisUrl() - Method in class edu.cornell.mannlib.vitro.webapp.web.templatemodels.individual.VIVOIndividualTemplateModel

CoInvestigationData - Class in edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils

CoInvestigationData(Collaborator, Set<Collaborator>, Set<Collaboration>, Map<String, Activity>) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils.CoInvestigationData

COINVESTIGATOR_VIS_SHORT_URL - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

coInvestigatorVisUrl() - Method in class edu.cornell.mannlib.vitro.webapp.web.templatemodels.individual.VIVOIndividualTemplateModel

Collaboration - Class in edu.cornell.mannlib.vitro.webapp.visualization.valueobjects

This is stores collaboration information mainly for ego-centric visualizations.

Collaboration(Collaborator, Collaborator, Activity, UniqueIDGenerator) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Collaboration

CollaborationComparator - Class in edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils

This Comparator is used to sort the edges based on their IDs in ascending order.

CollaborationComparator() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils.CollaborationComparator

CollaborationData - Class in edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils

CollaborationData(Collaborator, Set<Collaborator>, Set<Collaboration>) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils.CollaborationData

CollaborationDataViewHelper - Class in edu.cornell.mannlib.vitro.webapp.visualization.visutils

CollaborationDataViewHelper(CollaborationData) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.visutils.CollaborationDataViewHelper

Collaborator - Class in edu.cornell.mannlib.vitro.webapp.visualization.valueobjects

This stores collbaorator's information involved in ego-centric networks & represents a collaborator's activities.

Collaborator(String, UniqueIDGenerator) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Collaborator

CollaboratorComparator - Class in edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils

This Comparator is used to sort the nodes based on their IDs in ascending order.

CollaboratorComparator() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils.CollaboratorComparator

COLLEGE_LABEL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

COLLEGE_PUBLICATION_COUNT_VIS - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

COLLEGE_URL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

compare(AddAssociatedConceptGenerator.AssociatedConceptInfo, AddAssociatedConceptGenerator.AssociatedConceptInfo) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAssociatedConceptGenerator.AssociatedConceptInfoComparator

compare(ManageLabelsForPersonGenerator.LabelInformation, ManageLabelsForPersonGenerator.LabelInformation) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageLabelsForPersonGenerator.LabelInformationComparator

compare(Collaboration, Collaboration) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils.CollaborationComparator

compare(Collaborator, Collaborator) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils.CollaboratorComparator

Concept - Class in edu.cornell.mannlib.semservices.bo

Concept() - Constructor for class edu.cornell.mannlib.semservices.bo.Concept

default constructor

ConceptInfo - Class in edu.cornell.mannlib.semservices.bo

ConceptInfo() - Constructor for class edu.cornell.mannlib.semservices.bo.ConceptInfo

ConceptLabelMap - Class in edu.cornell.mannlib.vitro.webapp.visualization.model

ConceptLabelMap() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.model.ConceptLabelMap

ConceptPeopleMap - Class in edu.cornell.mannlib.vitro.webapp.visualization.model

ConceptPeopleMap() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.model.ConceptPeopleMap

ConceptSearchServiceUtils - Class in edu.cornell.mannlib.vitro.webapp.utils.ConceptSearchService

Utilities for search

ConceptSearchServiceUtils() - Constructor for class edu.cornell.mannlib.vitro.webapp.utils.ConceptSearchService.ConceptSearchServiceUtils

ConceptSearchServlet - Class in edu.cornell.mannlib.vitro.webapp.servlet

ConceptSearchServlet() - Constructor for class edu.cornell.mannlib.vitro.webapp.servlet.ConceptSearchServlet

ConceptSemanticTypesPreprocessor - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors

ConceptSemanticTypesPreprocessor() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.ConceptSemanticTypesPreprocessor

conceptSkosMosBase - Variable in class edu.cornell.mannlib.semservices.service.impl.AgrovocService

conceptSkosMosURL - Variable in class edu.cornell.mannlib.semservices.service.impl.AgrovocService

ConceptsNotFoundException - Exception in edu.cornell.mannlib.semservices.exceptions

ConceptsNotFoundException() - Constructor for exception edu.cornell.mannlib.semservices.exceptions.ConceptsNotFoundException

ConceptsNotFoundException(String) - Constructor for exception edu.cornell.mannlib.semservices.exceptions.ConceptsNotFoundException

ConceptsNotFoundException(Throwable) - Constructor for exception edu.cornell.mannlib.semservices.exceptions.ConceptsNotFoundException

ConceptsNotFoundException(String, Throwable) - Constructor for exception edu.cornell.mannlib.semservices.exceptions.ConceptsNotFoundException

conceptsSkosMosSearch - Variable in class edu.cornell.mannlib.semservices.service.impl.AgrovocService

conceptSubclass() - Method in class edu.cornell.mannlib.vitro.webapp.web.templatemodels.individual.VIVOIndividualTemplateModel

conceptToLabel - Variable in class edu.cornell.mannlib.vitro.webapp.visualization.model.ConceptLabelMap

conceptToLabel - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.VisualizationCaches

Concept to label

conceptToPeople - Variable in class edu.cornell.mannlib.vitro.webapp.visualization.model.ConceptPeopleMap

conceptToPeopleMap - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.VisualizationCaches

Map of people associated with a concept

ConstructedModel - Class in edu.cornell.mannlib.vitro.webapp.visualization.valueobjects

ConstructedModel(String, String) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.ConstructedModel

ConstructedModelTracker - Class in edu.cornell.mannlib.vitro.webapp.visualization.valueobjects

ConstructedModelTracker() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.ConstructedModelTracker

contextDestroyed(ServletContextEvent) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.setup.VisualizationSetup

contextDestroyed(ServletContextEvent) - Method in class edu.cornell.mannlib.vivo.auth.policy.SelfEditorRelationshipPolicy.Setup

contextDestroyed(ServletContextEvent) - Method in class edu.cornell.mannlib.vivo.orcid.OrcidContextSetup

contextDestroyed(ServletContextEvent) - Method in class org.vivoweb.webapp.startup.DataGetterN3Setup

contextDestroyed(ServletContextEvent) - Method in class org.vivoweb.webapp.startup.GeneratorSetup

contextDestroyed(ServletContextEvent) - Method in class org.vivoweb.webapp.startup.JSONWrapperSetup

contextDestroyed(ServletContextEvent) - Method in class org.vivoweb.webapp.startup.MenuManagementSetup

contextDestroyed(ServletContextEvent) - Method in class org.vivoweb.webapp.startup.SearchResultTemplateModelSetup

contextDestroyed(ServletContextEvent) - Method in class org.vivoweb.webapp.startup.TemplateModelSetup

contextInitialized(ServletContextEvent) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.setup.VisualizationSetup

contextInitialized(ServletContextEvent) - Method in class edu.cornell.mannlib.vivo.auth.policy.SelfEditorRelationshipPolicy.Setup

contextInitialized(ServletContextEvent) - Method in class edu.cornell.mannlib.vivo.orcid.OrcidContextSetup

contextInitialized(ServletContextEvent) - Method in class org.vivoweb.webapp.startup.DataGetterN3Setup

contextInitialized(ServletContextEvent) - Method in class org.vivoweb.webapp.startup.GeneratorSetup

contextInitialized(ServletContextEvent) - Method in class org.vivoweb.webapp.startup.JSONWrapperSetup

contextInitialized(ServletContextEvent) - Method in class org.vivoweb.webapp.startup.MenuManagementSetup

contextInitialized(ServletContextEvent) - Method in class org.vivoweb.webapp.startup.SearchResultTemplateModelSetup

contextInitialized(ServletContextEvent) - Method in class org.vivoweb.webapp.startup.TemplateModelSetup

COPI_NETWORK_DOWNLOAD_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

COPI_NETWORK_STREAM_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

COPI_UTILS_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

COPI_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

CoPIGrantCountConstructQueryRunner - Class in edu.cornell.mannlib.vitro.webapp.visualization.coprincipalinvestigator

CoPIGrantCountConstructQueryRunner(String, RDFService, Log) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.coprincipalinvestigator.CoPIGrantCountConstructQueryRunner

CoPIGrantCountQueryRunner - Class in edu.cornell.mannlib.vitro.webapp.visualization.coprincipalinvestigator

CoPIGrantCountQueryRunner(String, VitroRequest, Log) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.coprincipalinvestigator.CoPIGrantCountQueryRunner

CoPIGrantCountRequestHandler - Class in edu.cornell.mannlib.vitro.webapp.visualization.coprincipalinvestigator

CoPIGrantCountRequestHandler() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.coprincipalinvestigator.CoPIGrantCountRequestHandler

CoPIGraphMLWriter - Class in edu.cornell.mannlib.vitro.webapp.visualization.coprincipalinvestigator

CoPIGraphMLWriter(CollaborationData) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.coprincipalinvestigator.CoPIGraphMLWriter

COPIS_COUNT_PER_YEAR_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

COPIS_LIST_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

CoPIVisCodeGenerator - Class in edu.cornell.mannlib.vitro.webapp.visualization.coprincipalinvestigator

This class contains code for rendering sparklines and displaying tables for Co-PI visualization.

CoPIVisCodeGenerator(String, String, String, Map<String, Set<Collaborator>>, Log) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.coprincipalinvestigator.CoPIVisCodeGenerator

cornellNetId() - Method in class edu.cornell.mannlib.vivo.orcid.controller.OrcidAbstractHandler

CounterUtils - Class in edu.cornell.mannlib.vitro.webapp.visualization.utilities

CounterUtils() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.utilities.CounterUtils

CourseChecker - Class in edu.cornell.mannlib.vivo.auth.policy

Does the requested action involve a change to a Course that the self-editor is authorized to modify?

CourseChecker(AbstractPropertyStatementAction) - Constructor for class edu.cornell.mannlib.vivo.auth.policy.CourseChecker

createConcept(String, String) - Method in class edu.cornell.mannlib.semservices.service.impl.AgrovocService

createConcept(String, String, String) - Method in class edu.cornell.mannlib.semservices.service.impl.LCSHService

createConceptUsingXMLFromURL(Concept, String, String, boolean) - Static method in class edu.cornell.mannlib.semservices.util.SKOSUtils

createConceptUsingXMLModel(Concept, String, String, boolean) - Static method in class edu.cornell.mannlib.semservices.util.SKOSUtils

The above code, although functional, does not take advantage of the fact that we can actually read and query the RDF in precisely the manner we wish.

CSV_OUTPUT_FORMAT - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

CURRENT_YEAR - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.VOConstants

currentUser - Variable in class edu.cornell.mannlib.vivo.orcid.controller.OrcidAbstractHandler

CustomLock - Class in edu.cornell.mannlib.vitro.webapp.visualization.visutils

CustomLock() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.visutils.CustomLock

D

DATA_RENDER_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

DATA_VISUALIZATION_SERVICE_URL_PREFIX - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

DataGetterN3Setup - Class in org.vivoweb.webapp.startup

DataGetterN3Setup() - Constructor for class org.vivoweb.webapp.startup.DataGetterN3Setup

DataVisualizationController - Class in edu.cornell.mannlib.vitro.webapp.controller.visualization

Services a visualization request.

DataVisualizationController() - Constructor for class edu.cornell.mannlib.vitro.webapp.controller.visualization.DataVisualizationController

dbpedia_endpoint - Variable in class edu.cornell.mannlib.semservices.service.impl.AgrovocService

DCCreatorForDocuments - Class in org.vivoweb.reasoner.plugin

DCCreatorForDocuments() - Constructor for class org.vivoweb.reasoner.plugin.DCCreatorForDocuments

DCTitleForDocuments - Class in org.vivoweb.reasoner.plugin

DCTitleForDocuments() - Constructor for class org.vivoweb.reasoner.plugin.DCTitleForDocuments

DEFAULT_ACTIVITY_YEAR - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.VOConstants

DEFAULT_EXTERNAL_ID_COMMON_NAME - Static variable in class edu.cornell.mannlib.vivo.orcid.controller.OrcidIntegrationController

DEFAULT_GRANT_YEAR - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.VOConstants

DEFAULT_PUBLICATION_YEAR - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.VOConstants

DEPARTMENT_COMPARISON_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

DEPARTMENT_LABEL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

DEPARTMENT_URL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

DISCIPLINE_ID_TO_LABEL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.MapOfScienceConstants

DISCIPLINE_TO_ACTIVTY_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

displayNodeInfo(Node) - Static method in class edu.cornell.mannlib.semservices.util.XMLUtils

doAddNew(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditorshipToPersonGenerator

doAddNew(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddPublicationToPersonGenerator

DOCUMENT_BLURB - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

DOCUMENT_DESCRIPTION - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

DOCUMENT_JOURNAL_LABEL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

DOCUMENT_LABEL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

DOCUMENT_MONIKER - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

DOCUMENT_PUBLICATION_DATE - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

DOCUMENT_PUBLICATION_YEAR - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

DOCUMENT_PUBLICATION_YEAR_MONTH - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

DOCUMENT_PUBLICATION_YEAR_USING_1_1_PROPERTY - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

DOCUMENT_URL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

DocumentFieldNotFoundException - Exception in edu.cornell.mannlib.vitro.webapp.visualization.exceptions

DocumentFieldNotFoundException(String) - Constructor for exception edu.cornell.mannlib.vitro.webapp.visualization.exceptions.DocumentFieldNotFoundException

DocumentFieldNotFoundException(Exception) - Constructor for exception edu.cornell.mannlib.vitro.webapp.visualization.exceptions.DocumentFieldNotFoundException

doGet(HttpServletRequest, HttpServletResponse) - Method in class edu.cornell.mannlib.vitro.webapp.controller.visualization.AjaxVisualizationController

doGet(HttpServletRequest, HttpServletResponse) - Method in class edu.cornell.mannlib.vitro.webapp.controller.visualization.DataVisualizationController

doGet(HttpServletRequest, HttpServletResponse) - Method in class edu.cornell.mannlib.vitro.webapp.servlet.ConceptSearchServlet

doGet(HttpServletRequest, HttpServletResponse) - Method in class edu.cornell.mannlib.vivo.orcid.controller.OrcidIntegrationController

Get in before FreemarkerHttpServlet for special handling.

doPost(HttpServletRequest, HttpServletResponse) - Method in class edu.cornell.mannlib.vitro.webapp.controller.harvester.FileHarvestController

doPost(HttpServletRequest, HttpServletResponse) - Method in class edu.cornell.mannlib.vitro.webapp.servlet.ConceptSearchServlet

doRequest(VitroRequest, HttpServletResponse) - Method in class edu.cornell.mannlib.vitro.webapp.controller.ajax.HomePageAjaxController

doRequest(VitroRequest, HttpServletResponse) - Method in class edu.cornell.mannlib.vitro.webapp.controller.ajax.QrCodeAjaxController

DYNAMIC_RENDER_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

E

EditorshipInfo(String, String, String, String) - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditorsToInformationResourceGenerator.EditorshipInfo

edu.cornell.mannlib.semservices.bo - package edu.cornell.mannlib.semservices.bo

edu.cornell.mannlib.semservices.exceptions - package edu.cornell.mannlib.semservices.exceptions

edu.cornell.mannlib.semservices.service - package edu.cornell.mannlib.semservices.service

edu.cornell.mannlib.semservices.service.impl - package edu.cornell.mannlib.semservices.service.impl

edu.cornell.mannlib.semservices.util - package edu.cornell.mannlib.semservices.util

edu.cornell.mannlib.vitro.webapp.controller - package edu.cornell.mannlib.vitro.webapp.controller

edu.cornell.mannlib.vitro.webapp.controller.ajax - package edu.cornell.mannlib.vitro.webapp.controller.ajax

edu.cornell.mannlib.vitro.webapp.controller.freemarker - package edu.cornell.mannlib.vitro.webapp.controller.freemarker

edu.cornell.mannlib.vitro.webapp.controller.harvester - package edu.cornell.mannlib.vitro.webapp.controller.harvester

edu.cornell.mannlib.vitro.webapp.controller.visualization - package edu.cornell.mannlib.vitro.webapp.controller.visualization

edu.cornell.mannlib.vitro.webapp.edit.n3editing - package edu.cornell.mannlib.vitro.webapp.edit.n3editing

edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators - package edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors - package edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors

edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.utils - package edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.utils

edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding - package edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding

edu.cornell.mannlib.vitro.webapp.searchindex.extensions - package edu.cornell.mannlib.vitro.webapp.searchindex.extensions

edu.cornell.mannlib.vitro.webapp.servlet - package edu.cornell.mannlib.vitro.webapp.servlet

edu.cornell.mannlib.vitro.webapp.utils.ConceptSearchService - package edu.cornell.mannlib.vitro.webapp.utils.ConceptSearchService

edu.cornell.mannlib.vitro.webapp.utils.dataGetter - package edu.cornell.mannlib.vitro.webapp.utils.dataGetter

edu.cornell.mannlib.vitro.webapp.utils.menuManagement - package edu.cornell.mannlib.vitro.webapp.utils.menuManagement

edu.cornell.mannlib.vitro.webapp.visualization.capabilitymap - package edu.cornell.mannlib.vitro.webapp.visualization.capabilitymap

edu.cornell.mannlib.vitro.webapp.visualization.coauthorship - package edu.cornell.mannlib.vitro.webapp.visualization.coauthorship

edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils - package edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils

edu.cornell.mannlib.vitro.webapp.visualization.constants - package edu.cornell.mannlib.vitro.webapp.visualization.constants

edu.cornell.mannlib.vitro.webapp.visualization.coprincipalinvestigator - package edu.cornell.mannlib.vitro.webapp.visualization.coprincipalinvestigator

edu.cornell.mannlib.vitro.webapp.visualization.exceptions - package edu.cornell.mannlib.vitro.webapp.visualization.exceptions

edu.cornell.mannlib.vitro.webapp.visualization.mapofscience - package edu.cornell.mannlib.vitro.webapp.visualization.mapofscience

edu.cornell.mannlib.vitro.webapp.visualization.model - package edu.cornell.mannlib.vitro.webapp.visualization.model

edu.cornell.mannlib.vitro.webapp.visualization.modelconstructor - package edu.cornell.mannlib.vitro.webapp.visualization.modelconstructor

edu.cornell.mannlib.vitro.webapp.visualization.modelconstructor.factory - package edu.cornell.mannlib.vitro.webapp.visualization.modelconstructor.factory

edu.cornell.mannlib.vitro.webapp.visualization.persongrantcount - package edu.cornell.mannlib.vitro.webapp.visualization.persongrantcount

edu.cornell.mannlib.vitro.webapp.visualization.personlevel - package edu.cornell.mannlib.vitro.webapp.visualization.personlevel

edu.cornell.mannlib.vitro.webapp.visualization.personpubcount - package edu.cornell.mannlib.vitro.webapp.visualization.personpubcount

edu.cornell.mannlib.vitro.webapp.visualization.setup - package edu.cornell.mannlib.vitro.webapp.visualization.setup

edu.cornell.mannlib.vitro.webapp.visualization.temporalgraph - package edu.cornell.mannlib.vitro.webapp.visualization.temporalgraph

edu.cornell.mannlib.vitro.webapp.visualization.tools - package edu.cornell.mannlib.vitro.webapp.visualization.tools

edu.cornell.mannlib.vitro.webapp.visualization.utilities - package edu.cornell.mannlib.vitro.webapp.visualization.utilities

edu.cornell.mannlib.vitro.webapp.visualization.valueobjects - package edu.cornell.mannlib.vitro.webapp.visualization.valueobjects

edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json - package edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json

edu.cornell.mannlib.vitro.webapp.visualization.visutils - package edu.cornell.mannlib.vitro.webapp.visualization.visutils

edu.cornell.mannlib.vitro.webapp.web.templatemodels.individual - package edu.cornell.mannlib.vitro.webapp.web.templatemodels.individual

edu.cornell.mannlib.vitro.webapp.web.templatemodels.individuallist - package edu.cornell.mannlib.vitro.webapp.web.templatemodels.individuallist

edu.cornell.mannlib.vitro.webapp.web.templatemodels.searchresult - package edu.cornell.mannlib.vitro.webapp.web.templatemodels.searchresult

edu.cornell.mannlib.vivo.auth.policy - package edu.cornell.mannlib.vivo.auth.policy

edu.cornell.mannlib.vivo.orcid - package edu.cornell.mannlib.vivo.orcid

edu.cornell.mannlib.vivo.orcid.controller - package edu.cornell.mannlib.vivo.orcid.controller

endIndexing() - Method in class edu.cornell.mannlib.vitro.webapp.searchindex.extensions.LabelsAcrossContextNodes

Entity - Class in edu.cornell.mannlib.vitro.webapp.visualization.valueobjects

original @author bkoniden (Deepak Konidena) modified by @author cdtank (Chintan Tank)

Entity(String, String) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Entity

Entity(String) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Entity

ENTITY_COMPARISON_VIS - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

ERROR_TEMPLATE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

event() - Method in class edu.cornell.mannlib.vitro.webapp.web.templatemodels.individual.VIVOIndividualTemplateModel

exec() - Method in class edu.cornell.mannlib.vivo.orcid.controller.OrcidAddExternalIdHandler

exec() - Method in class edu.cornell.mannlib.vivo.orcid.controller.OrcidAuthAuthenticateHandler

exec() - Method in class edu.cornell.mannlib.vivo.orcid.controller.OrcidAuthExternalIdsHandler

exec() - Method in class edu.cornell.mannlib.vivo.orcid.controller.OrcidCallbackHandler

exec() - Method in class edu.cornell.mannlib.vivo.orcid.controller.OrcidDefaultHandler

exec() - Method in class edu.cornell.mannlib.vivo.orcid.controller.OrcidReadProfileHandler

ExportQrCodeController - Class in edu.cornell.mannlib.vitro.webapp.controller

ExportQrCodeController() - Constructor for class edu.cornell.mannlib.vitro.webapp.controller.ExportQrCodeController

ExternalConceptService - Interface in edu.cornell.mannlib.semservices.service

extractConceptId(String) - Method in class edu.cornell.mannlib.semservices.service.impl.AgrovocService

extractConceptId(String) - Method in class edu.cornell.mannlib.semservices.service.impl.LCSHService

F

FILE_CONTENT_KEY - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.DataVisualizationController

FILE_CONTENT_TYPE_KEY - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.DataVisualizationController

FILE_NAME_KEY - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.DataVisualizationController

FileHarvestController - Class in edu.cornell.mannlib.vitro.webapp.controller.harvester

FileHarvestController() - Constructor for class edu.cornell.mannlib.vitro.webapp.controller.harvester.FileHarvestController

findAdditionalURIsToIndex(Statement) - Method in class edu.cornell.mannlib.vitro.webapp.searchindex.extensions.LabelsAcrossContextNodes

If this is a "label" statement, check to see if the subject has any acceptable partners across acceptable context nodes.

findIndividual() - Method in class edu.cornell.mannlib.vivo.orcid.controller.OrcidAbstractHandler

FirstAndLastNameValidator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing

FirstAndLastNameValidator(String) - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.FirstAndLastNameValidator

firstName - Variable in class edu.cornell.mannlib.vitro.webapp.visualization.model.Person

FREEMARKERIZED_VISUALIZATION_URL_PREFIX - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

FULL_SPARKLINE_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

G

GemetService - Class in edu.cornell.mannlib.semservices.service.impl

GemetService() - Constructor for class edu.cornell.mannlib.semservices.service.impl.GemetService

generateAjaxVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.capabilitymap.CapabilityMapRequestHandler

generateAjaxVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.coauthorship.CoAuthorshipRequestHandler

generateAjaxVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.coprincipalinvestigator.CoPIGrantCountRequestHandler

generateAjaxVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.mapofscience.MapOfScienceVisualizationRequestHandler

generateAjaxVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.modelconstructor.ModelConstructorRequestHandler

generateAjaxVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.persongrantcount.PersonGrantCountRequestHandler

generateAjaxVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.personlevel.PersonLevelRequestHandler

generateAjaxVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.personpubcount.PersonPublicationCountRequestHandler

generateAjaxVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.temporalgraph.TemporalGrantVisualizationRequestHandler

generateAjaxVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.temporalgraph.TemporalPublicationVisualizationRequestHandler

generateAjaxVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.tools.ToolsRequestHandler

generateAjaxVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.UtilitiesRequestHandler

generateAjaxVisualization(VitroRequest, Log, Dataset) - Method in interface edu.cornell.mannlib.vitro.webapp.visualization.visutils.VisualizationRequestHandler

generateDataVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.capabilitymap.CapabilityMapRequestHandler

generateDataVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.coauthorship.CoAuthorshipRequestHandler

generateDataVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.coprincipalinvestigator.CoPIGrantCountRequestHandler

generateDataVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.mapofscience.MapOfScienceVisualizationRequestHandler

generateDataVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.modelconstructor.ModelConstructorRequestHandler

generateDataVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.persongrantcount.PersonGrantCountRequestHandler

generateDataVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.personlevel.PersonLevelRequestHandler

generateDataVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.personpubcount.PersonPublicationCountRequestHandler

generateDataVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.temporalgraph.TemporalGrantVisualizationRequestHandler

generateDataVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.temporalgraph.TemporalPublicationVisualizationRequestHandler

generateDataVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.tools.ToolsRequestHandler

generateDataVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.UtilitiesRequestHandler

generateDataVisualization(VitroRequest, Log, Dataset) - Method in interface edu.cornell.mannlib.vitro.webapp.visualization.visutils.VisualizationRequestHandler

generateModelIdentifier(String, String) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.ConstructedModelTracker

generateN3Optional() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAuthorsToInformationResourceGenerator

generateN3Optional() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditorsToInformationResourceGenerator

generateN3Optional(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.VIVODefaultAddMissingIndividualFormGenerator

generateNewResources(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.VIVODefaultAddMissingIndividualFormGenerator

generateStandardVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.capabilitymap.CapabilityMapRequestHandler

generateStandardVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.coauthorship.CoAuthorshipRequestHandler

generateStandardVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.coprincipalinvestigator.CoPIGrantCountRequestHandler

generateStandardVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.mapofscience.MapOfScienceVisualizationRequestHandler

generateStandardVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.modelconstructor.ModelConstructorRequestHandler

generateStandardVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.persongrantcount.PersonGrantCountRequestHandler

generateStandardVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.personlevel.PersonLevelRequestHandler

generateStandardVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.personpubcount.PersonPublicationCountRequestHandler

generateStandardVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.temporalgraph.TemporalGrantVisualizationRequestHandler

generateStandardVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.temporalgraph.TemporalPublicationVisualizationRequestHandler

generateStandardVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.tools.ToolsRequestHandler

generateStandardVisualization(VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.UtilitiesRequestHandler

generateStandardVisualization(VitroRequest, Log, Dataset) - Method in interface edu.cornell.mannlib.vitro.webapp.visualization.visutils.VisualizationRequestHandler

generateVisualizationForShortURLRequests(Map<String, String>, VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.capabilitymap.CapabilityMapRequestHandler

generateVisualizationForShortURLRequests(Map<String, String>, VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.coauthorship.CoAuthorshipRequestHandler

generateVisualizationForShortURLRequests(Map<String, String>, VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.coprincipalinvestigator.CoPIGrantCountRequestHandler

generateVisualizationForShortURLRequests(Map<String, String>, VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.mapofscience.MapOfScienceVisualizationRequestHandler

generateVisualizationForShortURLRequests(Map<String, String>, VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.modelconstructor.ModelConstructorRequestHandler

generateVisualizationForShortURLRequests(Map<String, String>, VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.persongrantcount.PersonGrantCountRequestHandler

generateVisualizationForShortURLRequests(Map<String, String>, VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.personlevel.PersonLevelRequestHandler

generateVisualizationForShortURLRequests(Map<String, String>, VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.personpubcount.PersonPublicationCountRequestHandler

generateVisualizationForShortURLRequests(Map<String, String>, VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.temporalgraph.TemporalGrantVisualizationRequestHandler

generateVisualizationForShortURLRequests(Map<String, String>, VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.temporalgraph.TemporalPublicationVisualizationRequestHandler

generateVisualizationForShortURLRequests(Map<String, String>, VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.tools.ToolsRequestHandler

generateVisualizationForShortURLRequests(Map<String, String>, VitroRequest, Log, Dataset) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.UtilitiesRequestHandler

generateVisualizationForShortURLRequests(Map<String, String>, VitroRequest, Log, Dataset) - Method in interface edu.cornell.mannlib.vitro.webapp.visualization.visutils.VisualizationRequestHandler

GeneratorSetup - Class in org.vivoweb.webapp.startup

GeneratorSetup() - Constructor for class org.vivoweb.webapp.startup.GeneratorSetup

GenericQueryMap - Class in edu.cornell.mannlib.vitro.webapp.visualization.valueobjects

Right now this is just acting as a hashmap but in future we would want to provide more detailed info other than just what properties had what values.

GenericQueryMap() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.GenericQueryMap

GenericQueryRunner - Class in edu.cornell.mannlib.vitro.webapp.visualization.visutils

This query runner is used to run a generic sparql query based on the "select", "where" & "filter" rules provided to it.

GenericQueryRunner(Map<String, String>, String, String, String, Dataset) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.visutils.GenericQueryRunner

GenericQueryRunnerOnModel - Class in edu.cornell.mannlib.vitro.webapp.visualization.visutils

This query runner is used to run a generic sparql query based on the "select", "where" & "filter" rules provided to it.

GenericQueryRunnerOnModel(Map<String, String>, String, String, String, Model) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.visutils.GenericQueryRunnerOnModel

GeoFocusMapLocations - Class in edu.cornell.mannlib.vitro.webapp.controller.ajax

GeoFocusMapLocations(HttpServlet, VitroRequest, HttpServletResponse) - Constructor for class edu.cornell.mannlib.vitro.webapp.controller.ajax.GeoFocusMapLocations

GeoFocusResearcherCount - Class in edu.cornell.mannlib.vitro.webapp.controller.ajax

GeoFocusResearcherCount(HttpServlet, VitroRequest, HttpServletResponse) - Constructor for class edu.cornell.mannlib.vitro.webapp.controller.ajax.GeoFocusResearcherCount

get(RDFService) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.CachingRDFServiceExecutor

Return the cached results if present, or start the task.

getActivities() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SubEntity

getActivityDate() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Activity

This method should be used to get the raw date & not the parsed publication year.

getActivityLabel() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Activity

getActivityTypeQueryForChildVClassOptions(VitroRequest, ChildVClassesOptions) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddRoleToPersonTwoStageGenerator

Utility method for subclasses to make a query for type from a ChildVClassesOptions object.

getActivityTypeQueryForConstantOptions(VitroRequest, ConstantFieldOptions) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddRoleToPersonTwoStageGenerator

Utility method for subclasses to make a query for type from a ConstantFieldOptions object.

getActivityTypeQueryForIndividualsViaClassGroupOptions(VitroRequest, IndividualsViaClassGroupOptions) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddRoleToPersonTwoStageGenerator

Utility method for subclasses to make a query for type from a IndividualsViaClassGroupOptions object.

getActivityURI() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Activity

getActivityYearToCollaborators(CollaborationData) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.UtilityFunctions

This method is used to return a mapping between activity year & all the collaborators that published with ego in that year.

getAdjacentNodes(String) - Method in class edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.CalculateParameters

getAgrovocTermCode(String) - Method in class edu.cornell.mannlib.semservices.service.impl.AgrovocService

getAllModels() - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.ConstructedModelTracker

getAllTranslationsForConcept(String, String) - Method in class edu.cornell.mannlib.semservices.service.impl.GemetService

getAltLabelList() - Method in class edu.cornell.mannlib.semservices.bo.Concept

getAuthorName() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAuthorsToInformationResourceGenerator.AuthorshipInfo

getAuthorName() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.personpubcount.PersonPublicationCountQueryRunner

getAuthorshipName() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAuthorsToInformationResourceGenerator.AuthorshipInfo

getAuthorshipsQuery() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAuthorsToInformationResourceGenerator

getAuthorshipUri() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAuthorsToInformationResourceGenerator.AuthorshipInfo

getAuthorUri() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAuthorsToInformationResourceGenerator.AuthorshipInfo

getAvailableLangs(String) - Method in class edu.cornell.mannlib.semservices.service.impl.GemetService

getBestMatch() - Method in class edu.cornell.mannlib.semservices.bo.Concept

getBroaderURIList() - Method in class edu.cornell.mannlib.semservices.bo.Concept

getBuiltFromCacheTime() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils.CollaborationData

getClassIntersectionsMap(Model) - Method in class edu.cornell.mannlib.vitro.webapp.utils.dataGetter.InternalClassesDataGetter

getClassType() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.utils.ProcessInternalClassDataGetterN3

getCloseMatchURIList() - Method in class edu.cornell.mannlib.semservices.bo.Concept

getCoAuthorshipGraphMLContent() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.coauthorship.CoAuthorshipGraphMLWriter

getCollaborationActivities() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Collaboration

getCollaborationID() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Collaboration

getCollaborationMatrix() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.CollaborationDataViewHelper

getCollaborations() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils.CollaborationData

getCollaboratorActivities() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Collaborator

getCollaboratorID() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Collaborator

getCollaboratorName() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Collaborator

getCollaborators() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils.CollaborationData

getCollaborators() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.CollaborationDataViewHelper

getCollaboratorsCount() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.CollaborationDataViewHelper

getCollaboratorshipNetworkLink(String, String, String) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.UtilityFunctions

getCollaboratorURI() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Collaborator

getConcept(String) - Method in class edu.cornell.mannlib.semservices.service.impl.GemetService

getConceptByKeyword(String, String, String, String, String) - Method in class edu.cornell.mannlib.semservices.service.impl.AgrovocService

getConceptId() - Method in class edu.cornell.mannlib.semservices.bo.Concept

getConceptInfoByTermcodeXML(String, String) - Method in class edu.cornell.mannlib.semservices.service.impl.AgrovocService

getConceptInfoByURI(String, String, String) - Method in class edu.cornell.mannlib.semservices.service.impl.AgrovocService

getConceptLabel() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAssociatedConceptGenerator.AssociatedConceptInfo

getConceptList() - Method in class edu.cornell.mannlib.semservices.bo.ConceptInfo

getConcepts(String) - Method in interface edu.cornell.mannlib.semservices.service.ExternalConceptService

getConcepts(String) - Method in class edu.cornell.mannlib.semservices.service.impl.AgrovocService

getConcepts(String) - Method in class edu.cornell.mannlib.semservices.service.impl.GemetService

getConcepts(String) - Method in class edu.cornell.mannlib.semservices.service.impl.LCSHService

getConcepts(String) - Method in class edu.cornell.mannlib.semservices.service.impl.UMLSService

getConceptsByURIWithSparql(String) - Method in interface edu.cornell.mannlib.semservices.service.ExternalConceptService

getConceptsByURIWithSparql(String) - Method in class edu.cornell.mannlib.semservices.service.impl.AgrovocService

getConceptsByURIWithSparql(String) - Method in class edu.cornell.mannlib.semservices.service.impl.GemetService

getConceptsByURIWithSparql(String) - Method in class edu.cornell.mannlib.semservices.service.impl.LCSHService

getConceptsByURIWithSparql(String) - Method in class edu.cornell.mannlib.semservices.service.impl.UMLSService

getConceptSearchServiceClassName(String) - Static method in class edu.cornell.mannlib.vitro.webapp.utils.ConceptSearchService.ConceptSearchServiceUtils

getConceptSemanticTypeLabel() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAssociatedConceptGenerator.AssociatedConceptInfo

getConceptSemanticTypeURI() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAssociatedConceptGenerator.AssociatedConceptInfo

getConceptsMatchingKeyword(String) - Method in class edu.cornell.mannlib.semservices.service.impl.GemetService

getConceptURI() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAssociatedConceptGenerator.AssociatedConceptInfo

getConceptURIFromRDF(String) - Method in class edu.cornell.mannlib.semservices.service.impl.AgrovocService

getConceptURIFromXML(String) - Method in class edu.cornell.mannlib.semservices.service.impl.LCSHService

getConceptURISFromJSON(String) - Method in class edu.cornell.mannlib.semservices.service.impl.LCSHService

getConceptURIsListFromRDF(String) - Method in class edu.cornell.mannlib.semservices.service.impl.AgrovocService

getConceptXML(String) - Static method in class edu.cornell.mannlib.semservices.util.SKOSUtils

getConstructedModel() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.coprincipalinvestigator.CoPIGrantCountConstructQueryRunner

getConstructedModel() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.modelconstructor.PersonToGrantsModelConstructor

getConstructedModel() - Method in interface edu.cornell.mannlib.vitro.webapp.visualization.visutils.CachedModelConstructor

getConstructedModel() - Method in interface edu.cornell.mannlib.vitro.webapp.visualization.visutils.ModelConstructor

getCoPIGraphMLContent() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.coprincipalinvestigator.CoPIGraphMLWriter

getCSVDownloadURL(String, String, String) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.UtilityFunctions

getCurrentEntitiesCount() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.YearToEntityCountDataElement

getCurrentPredicate(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddUserDefinedConceptGenerator

getData(Map<String, Object>) - Method in class edu.cornell.mannlib.vivo.orcid.OrcidIdDataGetter

getDateTimePrecisionURI() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

getDateTimeValueTypeURI() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

getDateTimeValueURI() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

getDbpediaDescription(String) - Method in class edu.cornell.mannlib.semservices.service.impl.AgrovocService

getDefaultgrantToRolePredicate() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

getDefaultroleToGrantPredicate() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

getDefinedBy() - Method in class edu.cornell.mannlib.semservices.bo.Concept

getDefinition() - Method in class edu.cornell.mannlib.semservices.bo.Concept

getDeleteLinkURL() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageLabelsForPersonGenerator.LabelInformation

getDescription() - Method in class edu.cornell.mannlib.vitro.webapp.utils.ConceptSearchService.VocabSourceDescription

getDocumentBuilder() - Static method in class edu.cornell.mannlib.semservices.util.XMLUtils

getDocuments() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils.CoAuthorshipData

getDownloadDataLink() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

getEarliestActivityYearCount() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Collaborator

getEarliestCollaborationYearCount() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Collaboration

getEarliestRenderedGrantYear() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

getEarliestRenderedPublicationYear() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

getEarliestYearConsidered() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

getEdgeSchema() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils.CollaborationData

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAssociatedConceptGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAuthorsToInformationResourceGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddConceptThroughObjectPropertyGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditorshipToPersonGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditorsToInformationResourceGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditWebpageFormGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddFullNameToPersonGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddOrcidIdToPersonGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddPresenterRoleToPersonGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddPublicationToPersonGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddRoleToPersonTwoStageGenerator

URI of predicate between role context node and activity

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddUserDefinedConceptGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AutocompleteDataPropertyFormGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.GrantAdministeredByGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.GrantHasContributorGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageLabelsForPersonGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageWebpagesForIndividualGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.OrganizationAdministersGrantGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.OrganizationForTrainingGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.OrganizationHasPositionHistoryGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasAdviseeRelationshipGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasAdvisorRelationshipGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasAwardOrHonorGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasEducationalTraining

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasEmailGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasIssuedCredentialGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasPositionHistoryGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasPreferredTitleGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ProjectHasParticipantGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.SubjectHasMailingAddressGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.SubjectHasPhoneFaxNumberGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.VIVOManageLabelsGenerator

getEditConfiguration(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.VIVONewIndividualFormGenerator

getEditForm() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageLabelsForPersonGenerator

getEditForm() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageWebpagesForIndividualGenerator

getEditLinkURL() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageLabelsForPersonGenerator.LabelInformation

getEditMode(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditorshipToPersonGenerator

getEditMode(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

Methods for checking edit mode **

getEditMode(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddPublicationToPersonGenerator

getEditMode(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddRoleToPersonTwoStageGenerator

getEditMode(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AutocompleteDataPropertyFormGenerator

getEditMode(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.GrantHasContributorGenerator

getEditMode(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.OrganizationForTrainingGenerator

getEditMode(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasEducationalTraining

getEditMode(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasPositionHistoryGenerator

getEditMode(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ProjectHasParticipantGenerator

getEditorName() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditorsToInformationResourceGenerator.EditorshipInfo

getEditorshipName() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditorsToInformationResourceGenerator.EditorshipInfo

getEditorshipsQuery() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditorsToInformationResourceGenerator

getEditorshipUri() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditorsToInformationResourceGenerator.EditorshipInfo

getEditorUri() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditorsToInformationResourceGenerator.EditorshipInfo

getEgoCollaborator() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils.CollaborationData

getElementByName(Document, String) - Static method in class edu.cornell.mannlib.semservices.util.XMLUtils

getEmail() - Method in class edu.cornell.mannlib.vitro.webapp.web.templatemodels.searchresult.VIVOIndividualSearchResult

getEndDatePrecision() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddRoleToPersonTwoStageGenerator

getEndYearPredURI() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

getEntityClass() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SubEntity

getEntityLabel() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Entity

getEntityLabelFromDAO(VitroRequest, String) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.temporalgraph.OrganizationUtilityFunctions

getEntityTypeLabels() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SubEntity

getEntityURI() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Entity

getEntityURI() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.JsonObject

getExactMatchURIList() - Method in class edu.cornell.mannlib.semservices.bo.Concept

getException() - Method in class edu.cornell.mannlib.semservices.bo.SemanticServicesError

getExistingValuesInternalClass(String) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.utils.ProcessInternalClassDataGetterN3

getExistingValuesJSON(String, OntModel, ServletContext) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.utils.ProcessInternalClassDataGetterN3

getFileHarvestRootPath(HttpServletRequest) - Static method in class edu.cornell.mannlib.vitro.webapp.controller.harvester.FileHarvestController

Returns the path on this machine of the area within Harvester reserved for File Harvest.

getFilterRoleToActivityPredicate(String) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddRoleToPersonTwoStageGenerator

getFOAFPersonClassURI() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageLabelsForPersonGenerator

getFOAFPersonClassURI() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.VIVODefaultAddMissingIndividualFormGenerator

getFOAFPersonClassURI() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.VIVOManageLabelsGenerator

getFOAFPersonClassURI() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.VIVONewIndividualFormGenerator

getFullCodeToLanguageNameMap(List<HashMap<String, String>>) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageLabelsForPersonGenerator

getFullLanguagesNamesSortedList(List<Map<String, Object>>) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageLabelsForPersonGenerator

getFullTimelineNetworkLink() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

getGemetResults(String) - Method in class edu.cornell.mannlib.semservices.service.impl.GemetService

getGrants() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils.CoInvestigationData

getGrantToRolePredicate(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

getGrantType() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

getHarvesterPath(HttpServletRequest) - Static method in class edu.cornell.mannlib.vitro.webapp.controller.harvester.FileHarvestController

Returns the root location of the VIVO Harvester on this machine.

getHighestLevelOrganizationURI(ResultSet, Map<String, String>) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.temporalgraph.OrganizationUtilityFunctions

getHighestLevelOrganizationURI(Log, Dataset) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.temporalgraph.OrganizationUtilityFunctions

getHumanReadableType() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.ConstructedModel

getId() - Method in class edu.cornell.mannlib.semservices.bo.BaseObject

getIndividualLabel() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.ConstructedModel

getIndividualLabel() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Individual

getIndividualLabelFromDAO(VitroRequest, String) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.UtilityFunctions

getIndividualLocalName(String, VitroRequest) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.UtilityFunctions

This method will test whether the current uri is based off of default namespace.

getIndividualURI() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Individual

getIntervalToEndURI() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

getIntervalToStartURI() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

getIntervalTypeURI() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

getItemType(MultiValueEditSubmission) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.RoleToActivityPredicatePreprocessor

getItemType(MultiValueEditSubmission) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.RoleToPredicatePreprocessor

getJsonValue(JSONObject, String) - Method in class edu.cornell.mannlib.semservices.service.impl.GemetService

Get a string from a json object or an empty string if there is no value for the given key

getJsonValue(JSONObject, String) - Method in class edu.cornell.mannlib.semservices.service.impl.UMLSService

Get a string from a json object or an empty string if there is no value for the given key

getLabel() - Method in class edu.cornell.mannlib.semservices.bo.Concept

getLabel() - Method in class edu.cornell.mannlib.vitro.webapp.utils.ConceptSearchService.VocabSourceDescription

getLabel() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.JsonObject

getLabel() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.MapOfScience

getLabelLiteral() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageLabelsForPersonGenerator.LabelInformation

getLabelStringValue() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageLabelsForPersonGenerator.LabelInformation

getLanguageCode() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageLabelsForPersonGenerator.LabelInformation

getLanguageName() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageLabelsForPersonGenerator.LabelInformation

getLastCachedAtDateTime() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.JsonObject

getLastCachedAtDateTime() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.MapOfScience

getLastCachedAtDateTime() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SubEntity

getLatestActivityYearCount() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Collaborator

getLatestCollaborationYearCount() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Collaboration

getLatestRenderedGrantYear() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

getLatestRenderedPublicationYear() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

getLiteralVarNamesBase() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.utils.ProcessInternalClassDataGetterN3

getLocales(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageLabelsForPersonGenerator

getLock() - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.CustomLock

getMaxRankQueryStr() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAuthorsToInformationResourceGenerator

getMaxRankQueryStr() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditorsToInformationResourceGenerator

getMaxRankQueryStr() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditWebpageFormGenerator

getMessage() - Method in class edu.cornell.mannlib.semservices.bo.SemanticServicesError

getModel(String) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.ConstructedModelTracker

getModelType() - Method in interface edu.cornell.mannlib.vitro.webapp.visualization.visutils.CachedModelConstructor

getN3ForExistingGrant(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

getN3ForGrantRole(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

getN3ForNewGrant(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

getN3ForWebpage() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditWebpageFormGenerator

getN3Prefixes() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.VIVODefaultAddMissingIndividualFormGenerator

getN3PrefixString() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAuthorsToInformationResourceGenerator

N3 strings both required and optional

getN3PrefixString() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditorsToInformationResourceGenerator

N3 strings both required and optional

getNamespaceURI(String) - Method in class edu.cornell.mannlib.semservices.util.MetadataNamespaceContext

getNarrowerURIList() - Method in class edu.cornell.mannlib.semservices.bo.Concept

getNextNumericID() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.UniqueIDGenerator

getNodeSchema() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils.CollaborationData

getNodeWithXpath(Object, String) - Static method in class edu.cornell.mannlib.semservices.util.XMLUtils

getNumOfActivities() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Collaborator

getNumOfCollaborations() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Collaboration

getNumOfYearsToBeRendered() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

getObjectCountByYear(Set<String>, Map<String, String>) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.CounterUtils

getObjectMappingsForOrgAndSubOrgs(String, Set<String>, Set<String>, Map<String, Set<String>>, Map<String, Set<String>>, Map<String, Set<String>>, Map<String, Set<String>>) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.OrgUtils

getOrConstructModel(String, String, RDFService) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.modelconstructor.ModelConstructorUtilities

getOrCreateModel(String, RDFService) - Method in interface edu.cornell.mannlib.vitro.webapp.visualization.modelconstructor.factory.ModelFactoryInterface

getOrganizationTypes() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.JsonObject

getParents() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Entity

getParentURIsToLabel(String, Map<String, Set<String>>, Map<String, String>) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.OrgUtils

getParentURIToLabel() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.SubjectEntityJSON

getParsedActivityYear() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Activity

This method will be called to get the final/inferred year for the publication.

getPossibleActivityToRolePredicates() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddRoleToPersonTwoStageGenerator

getPossibleGrantToRolePredicates() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

getPossibleInversePropertiesForRole() - Static method in class org.vivoweb.webapp.util.ModelUtils

getPossiblePropertiesForRole() - Static method in class org.vivoweb.webapp.util.ModelUtils

getPossibleRoleToActivityPredicates() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddRoleToPersonTwoStageGenerator

getPossibleRoleToGrantPredicates() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

getPreferredTitle() - Method in class edu.cornell.mannlib.vitro.webapp.web.templatemodels.individuallist.VIVOListedIndividual

getPreferredTitle() - Method in class edu.cornell.mannlib.vitro.webapp.web.templatemodels.searchresult.VIVOIndividualSearchResult

getPrefix(String) - Method in class edu.cornell.mannlib.semservices.util.MetadataNamespaceContext

getPrefixes(String) - Method in class edu.cornell.mannlib.semservices.util.MetadataNamespaceContext

getPropertyForRoleInClass(String, WebappDaoFactory) - Static method in class org.vivoweb.webapp.util.ModelUtils

getPropertyFromJson(String) - Method in class edu.cornell.mannlib.semservices.service.impl.GemetService

getPublishedInJournal() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.MapOfScienceActivity

getPubsMapped() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.MapOfScience

getPubsWithInvalidJournals() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.MapOfScience

getPubsWithNoJournals() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.MapOfScience

getQuery() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageWebpagesForIndividualGenerator

getQueryResult() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.coauthorship.CoAuthorshipQueryRunner

getQueryResult() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.coprincipalinvestigator.CoPIGrantCountQueryRunner

getQueryResult() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.persongrantcount.PersonGrantCountQueryRunner

getQueryResult() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.personpubcount.PersonPublicationCountQueryRunner

getQueryResult() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.AllPropertiesQueryRunner

getQueryResult() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.GenericQueryRunner

getQueryResult() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.GenericQueryRunnerOnModel

getQueryResult() - Method in interface edu.cornell.mannlib.vitro.webapp.visualization.visutils.QueryRunner

getRangeTypes(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddConceptThroughObjectPropertyGenerator

getRelatedConcepts(String, String) - Method in class edu.cornell.mannlib.semservices.service.impl.GemetService

getRelatedUris(String) - Method in class edu.cornell.mannlib.semservices.service.impl.GemetService

getRenderedSparks() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

getRequiredPrivileges() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.capabilitymap.CapabilityMapRequestHandler

getRequiredPrivileges() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.coauthorship.CoAuthorshipRequestHandler

getRequiredPrivileges() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.coprincipalinvestigator.CoPIGrantCountRequestHandler

getRequiredPrivileges() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.mapofscience.MapOfScienceVisualizationRequestHandler

getRequiredPrivileges() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.modelconstructor.ModelConstructorRequestHandler

getRequiredPrivileges() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.persongrantcount.PersonGrantCountRequestHandler

getRequiredPrivileges() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.personlevel.PersonLevelRequestHandler

getRequiredPrivileges() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.personpubcount.PersonPublicationCountRequestHandler

getRequiredPrivileges() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.temporalgraph.TemporalGrantVisualizationRequestHandler

getRequiredPrivileges() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.temporalgraph.TemporalPublicationVisualizationRequestHandler

getRequiredPrivileges() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.tools.ToolsRequestHandler

getRequiredPrivileges() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.UtilitiesRequestHandler

getRequiredPrivileges() - Method in interface edu.cornell.mannlib.vitro.webapp.visualization.visutils.VisualizationRequestHandler

getRoleToActivityPredicate(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddRoleToPersonTwoStageGenerator

getRoleToGrantPredicate(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

getRoleToIntervalURI() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

getRoleType(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

Methods that are REQUIRED to be implemented in subclasses

getRoleType() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddResearcherRoleToPersonGenerator

getRoleType() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddReviewerRoleToPersonGenerator

getSchema() - Method in class edu.cornell.mannlib.vitro.webapp.utils.ConceptSearchService.VocabSourceDescription

getSchemeURI() - Method in class edu.cornell.mannlib.semservices.bo.Concept

getSearchResults(ServletContext, VitroRequest) - Static method in class edu.cornell.mannlib.vitro.webapp.utils.ConceptSearchService.ConceptSearchServiceUtils

getSemanticServicesError() - Method in class edu.cornell.mannlib.semservices.bo.SemanticServicesInfoBase

getSeverity() - Method in class edu.cornell.mannlib.semservices.bo.SemanticServicesError

getSiteConfigData(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.controller.freemarker.VIVOSiteAdminController

getSiteMaintenanceUrls(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.controller.freemarker.VIVOSiteAdminController

getSourceCollaborator() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Collaboration

getSparqlForAcFilter(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

getSparqlForAcFilter(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddPublicationToPersonGenerator

getSparqlForAcFilter(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddUserDefinedConceptGenerator

getSparqlForAcFilter(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AutocompleteDataPropertyFormGenerator

getSparqlForAcFilter(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasAdviseeRelationshipGenerator

getSparqlForAcFilter(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasAdvisorRelationshipGenerator

getSparqlPrefixQuery() - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryConstants

getStaffProvidedOrComputedHighestLevelOrganization(Log, Dataset, VitroRequest) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.temporalgraph.OrganizationUtilityFunctions

getStartDatePrecision() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddRoleToPersonTwoStageGenerator

getStartYearPredURI() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

getSubdisciplineActivity() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.MapOfScience

getSubEntities() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Entity

getSubEntities() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.MapOfScience

getSubjectEntityLabel() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.SubjectEntityJSON

getSubjectEntityURI() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.SubjectEntityJSON

getTargetCollaborator() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Collaboration

getTemplate() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditWebpageFormGenerator

getTemplate() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageLabelsForPersonGenerator

getTemplate() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageWebpagesForIndividualGenerator

getTermcodeByTerm(String) - Method in class edu.cornell.mannlib.semservices.service.impl.AgrovocService

Deprecated.

getTermCodeByTermAndLangXML(String, String, String, String, String) - Method in class edu.cornell.mannlib.semservices.service.impl.AgrovocService

getTermExpansion(String, String, String, String, String) - Method in class edu.cornell.mannlib.semservices.service.impl.AgrovocService

getTitle(String, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.controller.AboutQrCodesController

getTitle(String, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.controller.ExportQrCodeController

getTitle(String, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.controller.harvester.FileHarvestController

getTotalCollaborationshipCount() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

getType() - Method in class edu.cornell.mannlib.semservices.bo.Concept

getType() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAssociatedConceptGenerator.AssociatedConceptInfo

getType() - Method in class edu.cornell.mannlib.vitro.webapp.utils.dataGetter.InternalClassesDataGetter

getType() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.ConstructedModel

getType() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.MapOfScience

getUnknownActivityYearCount() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Collaborator

getUnknownCollaborationYearCount() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Collaboration

getUnknownYearGrants() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

getUnknownYearPublications() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

getUploadPath(VitroRequest) - Static method in class edu.cornell.mannlib.vitro.webapp.controller.harvester.FileHarvestController

Gets the location where we want to save uploaded files.

getUri() - Method in class edu.cornell.mannlib.semservices.bo.Concept

getUri() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.ConstructedModel

getUri() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.MapOfScience

getURIByTermAndLangXML(String, String, String, String, String) - Method in class edu.cornell.mannlib.semservices.service.impl.AgrovocService

getUrl() - Method in class edu.cornell.mannlib.vitro.webapp.utils.ConceptSearchService.VocabSourceDescription

getValidParsedDateTimeObject(String) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.UtilityFunctions

getValidYearFromCoreDateTimeString(String, String) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.UtilityFunctions

This method will be called to get the inferred end year for the entity.

getValueObjectContainer() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.coauthorship.CoAuthorshipVisCodeGenerator

getValueObjectContainer() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.coprincipalinvestigator.CoPIVisCodeGenerator

getValueObjectContainer() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.persongrantcount.PersonGrantCountVisCodeGenerator

getValueObjectContainer() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.personpubcount.PersonPublicationCountVisCodeGenerator

getVClasses(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageLabelsForPersonGenerator

getVClasses(String, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.VIVOManageLabelsGenerator

getVisContainerDivID() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

getVisMode() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.JsonObject

getVisualizationIDsToClassMap(ServletContext) - Static method in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationsDependencyInjector

getVisualizationIDToClass() - Method in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationInjector

getVivoCoreNamespace() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

Methods to return URIS for various predicates

getVocabLabel() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAssociatedConceptGenerator.AssociatedConceptInfo

getVocabSources() - Static method in class edu.cornell.mannlib.vitro.webapp.utils.ConceptSearchService.ConceptSearchServiceUtils

getVocabURI() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAssociatedConceptGenerator.AssociatedConceptInfo

getWsdl() - Method in class edu.cornell.mannlib.semservices.service.impl.AgrovocService

getYear() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.YearToEntityCountDataElement

getYearToActivityCount() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Collaboration

getYearToActivityCount() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Collaborator

getYearToActivityCount() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.JsonObject

getYearToActivityCount() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

getYearToActivityCount(Set<Activity>) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.UtilityFunctions

getYearToActivityCount(Collection<Activity>) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.UtilityFunctions

getYearToEntityCountDataTable() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

getYearToEntityCounter() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.YearToEntityCountDataElement

GRANT_END_DATE - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

GRANT_LABEL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

GRANT_START_DATE - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

GRANT_TEMPORAL_VIS_SHORT_URL - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

GRANT_URL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

GrantAdministeredByGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

GrantAdministeredByGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.GrantAdministeredByGenerator

GrantChecker - Class in edu.cornell.mannlib.vivo.auth.policy

Does the requested action involve a change to a Grant that the self-editor is authorized to modify?

GrantChecker(AbstractPropertyStatementAction) - Constructor for class edu.cornell.mannlib.vivo.auth.policy.GrantChecker

GrantHasContributorGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

GrantHasContributorGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.GrantHasContributorGenerator

grantToRoleYear - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.VisualizationCaches

Grant to year of start in role (grant uri -> year)

grantToYear - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.VisualizationCaches

Grant to year (grant uri -> year)

H

handleMalformedParameters(String, String, VitroRequest) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.UtilityFunctions

handleMalformedParameters(String, HttpServletResponse, Log) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.UtilityFunctions

HIGHEST_LEVEL_ORGANIZATION_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

HomePageAjaxController - Class in edu.cornell.mannlib.vitro.webapp.controller.ajax

Handle the AJAX functions that are specific to the "new" home page sections, at this point just the mapping of geographic locations.

HomePageAjaxController() - Constructor for class edu.cornell.mannlib.vitro.webapp.controller.ajax.HomePageAjaxController

I

IllegalConstructedModelIdentifierException - Exception in edu.cornell.mannlib.vitro.webapp.visualization.exceptions

IllegalConstructedModelIdentifierException(String) - Constructor for exception edu.cornell.mannlib.vitro.webapp.visualization.exceptions.IllegalConstructedModelIdentifierException

IllegalConstructedModelIdentifierException(Exception) - Constructor for exception edu.cornell.mannlib.vitro.webapp.visualization.exceptions.IllegalConstructedModelIdentifierException

IMAGE_UTILS_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

IMAGE_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

includeRequiredSystemData(ServletContext, Map<String, Object>) - Method in class edu.cornell.mannlib.vitro.webapp.utils.menuManagement.VIVOMenuManagementDataUtils

Individual - Class in edu.cornell.mannlib.vitro.webapp.visualization.valueobjects

Individual(String, String) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Individual

Individual(String) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Individual

INDIVIDUAL_URI_KEY - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

INDIVIDUAL_URL_PREFIX - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

individualsForClassesInternalQueryString - Static variable in class edu.cornell.mannlib.vitro.webapp.utils.dataGetter.InternalClassesDataGetter

infoContentEntity() - Method in class edu.cornell.mannlib.vitro.webapp.web.templatemodels.individual.VIVOIndividualTemplateModel

InfoContentEntityChecker - Class in edu.cornell.mannlib.vivo.auth.policy

Does the requested action involve a change to an Info Content Entity that the self-editor is authorized to modify?

InfoContentEntityChecker(AbstractPropertyStatementAction) - Constructor for class edu.cornell.mannlib.vivo.auth.policy.InfoContentEntityChecker

initializeEdgeSchema() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils.CoAuthorshipData

initializeEdgeSchema() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils.CoInvestigationData

initializeNodeSchema() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils.CoAuthorshipData

initializeNodeSchema() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils.CoInvestigationData

InstitutionalInternalClassController - Class in edu.cornell.mannlib.vitro.webapp.controller.freemarker

InstitutionalInternalClassController() - Constructor for class edu.cornell.mannlib.vitro.webapp.controller.freemarker.InstitutionalInternalClassController

InternalClassesDataGetter - Class in edu.cornell.mannlib.vitro.webapp.utils.dataGetter

This will pass these variables to the template: classGroupUri: uri of the classgroup associated with this page.

InternalClassesDataGetter(VitroRequest, Model, String) - Constructor for class edu.cornell.mannlib.vitro.webapp.utils.dataGetter.InternalClassesDataGetter

Constructor with display model and data getter URI that will be called by reflection.

isAuthorized(List<String>) - Method in class edu.cornell.mannlib.vivo.auth.policy.AdvisingRelationshipChecker

A self-editor is authorized to add, edit, or delete a statement if the subject or object refers to an Advising Relationship, and if the self-editor: 1) is an Advisor in that Relationship

isAuthorized(List<String>) - Method in class edu.cornell.mannlib.vivo.auth.policy.CourseChecker

A self-editor is authorized to add, edit, or delete a statement if the subject or object refers to a Course, and if the self-editor: 1) is a Teacher of that Course

isAuthorized(List<String>) - Method in class edu.cornell.mannlib.vivo.auth.policy.GrantChecker

A self-editor is authorized to add, edit, or delete a statement if the subject or object refers to a Grant, and if the self-editor: 1) is a Principal Investigator (PI) of that Grant, or 2) is a co-Principal Investigator (co-PI) of that Grant

isAuthorized(List<String>) - Method in class edu.cornell.mannlib.vivo.auth.policy.InfoContentEntityChecker

A self-editor is authorized to add, edit, or delete a statement if the subject or object refers to an Info Content Entity, and if the self-editor: 1) is an Author of that Info Content Entity, 2) is an Editor of that Info Content Entity, or 3) is Featured in that Info Content Entity.

isAuthorized(List<String>) - Method in class edu.cornell.mannlib.vivo.auth.policy.PresentationChecker

A self-editor is authorized to add, edit, or delete a statement if the subject or object refers to a Presentation, and if the self-editor: 1) is a Presenter of that Presentation

isAuthorized(List<String>) - Method in class edu.cornell.mannlib.vivo.auth.policy.ProjectOrServiceChecker

A self-editor is authorized to add, edit, or delete a statement if the subject or object refers to a Project or a Service, and if the self-editor: 1) is a Clinical Agent of that Project or Service

isAuthorized(IdentifierBundle, RequestedAction) - Method in class edu.cornell.mannlib.vivo.auth.policy.SelfEditorRelationshipPolicy

isCached() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.CachingRDFServiceExecutor

isEntityAPerson(VitroRequest, String) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.UtilityFunctions

isNew() - Method in class edu.cornell.mannlib.semservices.bo.BaseObject

isPersonType(VitroRequest, EditConfigurationVTwo) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageLabelsForPersonGenerator

isPersonType(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.VIVODefaultAddMissingIndividualFormGenerator

isPersonType(String, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.VIVOManageLabelsGenerator

isPersonType(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.VIVONewIndividualFormGenerator

isShortVisMode() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

isShowRoleLabelField(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

Methods with default values that may be overwritten when required by a subclass Both Default value and method that can be overwritten are included below

isShowRoleLabelField() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddReviewerRoleToPersonGenerator

itemToRolePredicate - Static variable in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.RoleToPredicatePreprocessor

itemType - Static variable in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.RoleToPredicatePreprocessor

J

JSON_OUTPUT_FORMAT - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

JsonObject - Class in edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json

JsonObject is used for creating data in JSON format, by just using the fields that are required to be included.

JsonObject(String) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.JsonObject

JSONWrapperSetup - Class in org.vivoweb.webapp.startup

JSONWrapperSetup() - Constructor for class org.vivoweb.webapp.startup.JSONWrapperSetup

L

LabelInformation(Literal, String, String, String, String) - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageLabelsForPersonGenerator.LabelInformation

LabelInformationComparator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageLabelsForPersonGenerator.LabelInformationComparator

LabelsAcrossContextNodes - Class in edu.cornell.mannlib.vitro.webapp.searchindex.extensions

If an individual has context nodes then the search document for that individual should include the labels of the partners across those nodes.

LabelsAcrossContextNodes() - Constructor for class edu.cornell.mannlib.vitro.webapp.searchindex.extensions.LabelsAcrossContextNodes

LAST_CACHED_AT_DATETIME - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

lastName - Variable in class edu.cornell.mannlib.vitro.webapp.visualization.model.Person

LCSHService - Class in edu.cornell.mannlib.semservices.service.impl

LCSHService() - Constructor for class edu.cornell.mannlib.semservices.service.impl.LCSHService

log - Variable in class edu.cornell.mannlib.semservices.service.impl.LCSHService

log - Static variable in class edu.cornell.mannlib.semservices.util.SKOSUtils

log - Static variable in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAuthorsToInformationResourceGenerator

log - Static variable in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditorsToInformationResourceGenerator

log - Static variable in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditWebpageFormGenerator

log - Static variable in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageLabelsForPersonGenerator

log - Static variable in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageWebpagesForIndividualGenerator

log - Static variable in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.VIVOManageLabelsGenerator

log - Static variable in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.AddAssociatedConceptsPreprocessor

log - Static variable in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.RoleToPredicatePreprocessor

logger - Variable in class edu.cornell.mannlib.semservices.service.impl.AgrovocService

logger - Variable in class edu.cornell.mannlib.semservices.service.impl.GemetService

logger - Variable in class edu.cornell.mannlib.semservices.service.impl.UMLSService

logger - Static variable in class edu.cornell.mannlib.semservices.util.XMLUtils

lowerLabelToConcepts - Variable in class edu.cornell.mannlib.vitro.webapp.visualization.model.ConceptLabelMap

M

MalformedQueryParametersException - Exception in edu.cornell.mannlib.vitro.webapp.visualization.exceptions

MalformedQueryParametersException(String) - Constructor for exception edu.cornell.mannlib.vitro.webapp.visualization.exceptions.MalformedQueryParametersException

MalformedQueryParametersException(Exception) - Constructor for exception edu.cornell.mannlib.vitro.webapp.visualization.exceptions.MalformedQueryParametersException

ManageGrantsForIndividualController - Class in edu.cornell.mannlib.vitro.webapp.controller.freemarker

ManageGrantsForIndividualController() - Constructor for class edu.cornell.mannlib.vitro.webapp.controller.freemarker.ManageGrantsForIndividualController

ManageLabelsForPersonGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

This generator is specifically for handling labels for a FOAF Person individual and is an object property form.

ManageLabelsForPersonGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageLabelsForPersonGenerator

ManageLabelsForPersonGenerator.LabelInformation - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

ManageLabelsForPersonGenerator.LabelInformationComparator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

ManageLabelsForPersonPreprocessor - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors

ManageLabelsForPersonPreprocessor(EditConfigurationVTwo) - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.ManageLabelsForPersonPreprocessor

ManagePeopleForOrganizationController - Class in edu.cornell.mannlib.vitro.webapp.controller.freemarker

ManagePeopleForOrganizationController() - Constructor for class edu.cornell.mannlib.vitro.webapp.controller.freemarker.ManagePeopleForOrganizationController

ManagePublicationsForIndividualController - Class in edu.cornell.mannlib.vitro.webapp.controller.freemarker

ManagePublicationsForIndividualController() - Constructor for class edu.cornell.mannlib.vitro.webapp.controller.freemarker.ManagePublicationsForIndividualController

ManageWebpagesForIndividualGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

This is an odd controller that is just drawing a page with links on it.

ManageWebpagesForIndividualGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ManageWebpagesForIndividualGenerator

MAP_OF_SCIENCE_VIS_SHORT_URL - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

MapOfScience - Class in edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json

MapOfScience(String) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.MapOfScience

MapOfScienceActivity - Class in edu.cornell.mannlib.vitro.webapp.visualization.valueobjects

MapOfScienceActivity(String) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.MapOfScienceActivity

MapOfScienceConstants - Class in edu.cornell.mannlib.vitro.webapp.visualization.constants

This contains the constants related to map of science visualization.

MapOfScienceConstants() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.constants.MapOfScienceConstants

mapOfScienceUrl() - Method in class edu.cornell.mannlib.vitro.webapp.web.templatemodels.individual.VIVOIndividualTemplateModel

MapOfScienceVisualizationRequestHandler - Class in edu.cornell.mannlib.vitro.webapp.visualization.mapofscience

MapOfScienceVisualizationRequestHandler() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.mapofscience.MapOfScienceVisualizationRequestHandler

MAX_NAME_TEXT_LENGTH - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.VisConstants

maximumMultipartFileSize() - Method in class edu.cornell.mannlib.vitro.webapp.controller.harvester.FileHarvestController

MenuManagementSetup - Class in org.vivoweb.webapp.startup

MenuManagementSetup() - Constructor for class org.vivoweb.webapp.startup.MenuManagementSetup

mergeEntityIfShareSameURI(Entity, Entity) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.temporalgraph.OrganizationUtilityFunctions

MetadataNamespaceContext - Class in edu.cornell.mannlib.semservices.util

MetadataNamespaceContext() - Constructor for class edu.cornell.mannlib.semservices.util.MetadataNamespaceContext

MINIMUM_PUBLICATION_YEAR - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.VOConstants

MINIMUM_YEARS_CONSIDERED_FOR_SPARKLINE - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.VisConstants

MODEL_TYPE - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.modelconstructor.PersonToGrantsModelConstructor

MODEL_TYPE_HUMAN_READABLE - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.modelconstructor.PersonToGrantsModelConstructor

ModelConstructor - Interface in edu.cornell.mannlib.vitro.webapp.visualization.visutils

ModelConstructorRequestHandler - Class in edu.cornell.mannlib.vitro.webapp.visualization.modelconstructor

ModelConstructorRequestHandler() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.modelconstructor.ModelConstructorRequestHandler

ModelConstructorUtilities - Class in edu.cornell.mannlib.vitro.webapp.visualization.modelconstructor

ModelConstructorUtilities() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.modelconstructor.ModelConstructorUtilities

ModelFactoryInterface - Interface in edu.cornell.mannlib.vitro.webapp.visualization.modelconstructor.factory

modelTypeToHumanReadableName - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.modelconstructor.ModelConstructorUtilities

Deprecated.

ModelUtils - Class in org.vivoweb.webapp.util

ModelUtils() - Constructor for class org.vivoweb.webapp.util.ModelUtils

modifyDocument(Individual, SearchInputDocument) - Method in class edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.CalculateParameters

modifyDocument(Individual, SearchInputDocument) - Method in class edu.cornell.mannlib.vitro.webapp.searchindex.extensions.LabelsAcrossContextNodes

If this individual is acceptable, locate the labels of any context partners across acceptable context nodes.

N

N3TransitionToV2Mapping - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing

N3TransitionToV2Mapping() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.N3TransitionToV2Mapping

NUM_CHARS_IN_YEAR_FORMAT - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.VOConstants

O

OBJECT - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

occ - Variable in class edu.cornell.mannlib.vivo.orcid.controller.OrcidAbstractHandler

ontModel - Variable in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.AddAssociatedConceptsPreprocessor

ORCID_ID - Static variable in class edu.cornell.mannlib.vivo.orcid.OrcidIdDataGetter

ORCID_IS_CONFIRMED - Static variable in class edu.cornell.mannlib.vivo.orcid.OrcidIdDataGetter

OrcidAbstractHandler - Class in edu.cornell.mannlib.vivo.orcid.controller

Some utility methods for the handlers.

OrcidAbstractHandler(VitroRequest) - Constructor for class edu.cornell.mannlib.vivo.orcid.controller.OrcidAbstractHandler

OrcidAddExternalIdHandler - Class in edu.cornell.mannlib.vivo.orcid.controller

We should now be logged in to ORCID and authorized to add an external ID.

OrcidAddExternalIdHandler(VitroRequest) - Constructor for class edu.cornell.mannlib.vivo.orcid.controller.OrcidAddExternalIdHandler

OrcidAuthAuthenticateHandler - Class in edu.cornell.mannlib.vivo.orcid.controller

We offered the confirmation screen, and they decided to go ahead.

OrcidAuthAuthenticateHandler(VitroRequest) - Constructor for class edu.cornell.mannlib.vivo.orcid.controller.OrcidAuthAuthenticateHandler

OrcidAuthExternalIdsHandler - Class in edu.cornell.mannlib.vivo.orcid.controller

We offered to add external IDs and they decided to go ahead.

OrcidAuthExternalIdsHandler(VitroRequest) - Constructor for class edu.cornell.mannlib.vivo.orcid.controller.OrcidAuthExternalIdsHandler

OrcidCallbackHandler - Class in edu.cornell.mannlib.vivo.orcid.controller

Handle the callbacks during the OAuth dance.

OrcidCallbackHandler(HttpServletRequest, HttpServletResponse) - Constructor for class edu.cornell.mannlib.vivo.orcid.controller.OrcidCallbackHandler

OrcidContextSetup - Class in edu.cornell.mannlib.vivo.orcid

Setup for the ORCID interface.

OrcidContextSetup() - Constructor for class edu.cornell.mannlib.vivo.orcid.OrcidContextSetup

OrcidDefaultHandler - Class in edu.cornell.mannlib.vivo.orcid.controller

A request came from the "Confirm" button on the individual profile.

OrcidDefaultHandler(VitroRequest) - Constructor for class edu.cornell.mannlib.vivo.orcid.controller.OrcidDefaultHandler

OrcidIdDataGetter - Class in edu.cornell.mannlib.vivo.orcid

This data getter should be assigned to the template that renders the list view for ORCID IDs.

OrcidIdDataGetter(VitroRequest) - Constructor for class edu.cornell.mannlib.vivo.orcid.OrcidIdDataGetter

OrcidIllegalStateException - Exception in edu.cornell.mannlib.vivo.orcid.controller

The OrcidConfirmationState is not as we expected.

OrcidIllegalStateException(String) - Constructor for exception edu.cornell.mannlib.vivo.orcid.controller.OrcidIllegalStateException

OrcidIllegalStateException(String, Throwable) - Constructor for exception edu.cornell.mannlib.vivo.orcid.controller.OrcidIllegalStateException

OrcidIntegrationController - Class in edu.cornell.mannlib.vivo.orcid.controller

New workflow:

OrcidIntegrationController() - Constructor for class edu.cornell.mannlib.vivo.orcid.controller.OrcidIntegrationController

OrcidReadProfileHandler - Class in edu.cornell.mannlib.vivo.orcid.controller

We should now know the user's ORCID, so read the user's public ORCID profile.

OrcidReadProfileHandler(VitroRequest) - Constructor for class edu.cornell.mannlib.vivo.orcid.controller.OrcidReadProfileHandler

org.vivoweb.reasoner.plugin - package org.vivoweb.reasoner.plugin

org.vivoweb.webapp.startup - package org.vivoweb.webapp.startup

org.vivoweb.webapp.util - package org.vivoweb.webapp.util

organisationToPeopleMap - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.VisualizationCaches

Map of people within an organisation (org uri -> list of person uri)

organization() - Method in class edu.cornell.mannlib.vitro.webapp.web.templatemodels.individual.VIVOIndividualTemplateModel

ORGANIZATION_LABEL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

ORGANIZATION_URL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

OrganizationAdministersGrantGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

OrganizationAdministersGrantGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.OrganizationAdministersGrantGenerator

OrganizationForTrainingGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

OrganizationForTrainingGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.OrganizationForTrainingGenerator

OrganizationHasPositionHistoryGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

OrganizationHasPositionHistoryGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.OrganizationHasPositionHistoryGenerator

organizationLabels - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.VisualizationCaches

Cache of organization labels (uri -> label)

OrganizationPeopleMap - Class in edu.cornell.mannlib.vitro.webapp.visualization.model

OrganizationPeopleMap() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.model.OrganizationPeopleMap

organizationSubOrgs - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.VisualizationCaches

Cache of organization to sub organizations (uri -> list of uris)

organizationToMostSpecificLabel - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.VisualizationCaches

Organization most specific type label (uri -> string)

organizationToPeople - Variable in class edu.cornell.mannlib.vitro.webapp.visualization.model.OrganizationPeopleMap

OrganizationUtilityFunctions - Class in edu.cornell.mannlib.vitro.webapp.visualization.temporalgraph

OrganizationUtilityFunctions() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.temporalgraph.OrganizationUtilityFunctions

OrgUtils - Class in edu.cornell.mannlib.vitro.webapp.visualization.utilities

OrgUtils() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.utilities.OrgUtils

OUTPUT_FORMAT_KEY - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

P

PARENT_ORGANIZATION_LABEL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

PARENT_ORGANIZATION_URL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

parse(String) - Static method in class edu.cornell.mannlib.semservices.util.XMLUtils

parse(InputStream) - Static method in class edu.cornell.mannlib.semservices.util.XMLUtils

parseModelIdentifier(String) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.ConstructedModelTracker

PATH_DEFAULT - Static variable in class edu.cornell.mannlib.vivo.orcid.controller.OrcidIntegrationController

PATH_TO_HARVESTED_DATA - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.harvester.FileHarvestController

Relative path from the Harvester root directory to the directory containing the script templates.

PATH_TO_HARVESTER_SCRIPTS - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.harvester.FileHarvestController

Relative path from the Harvester root directory to the directory containing the script templates.

PATH_TO_TEMPLATE_FILES - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.harvester.FileHarvestController

Relative path from the Harvester root directory to the directory where user-downloadable template files are stored.

PDF_RENDER_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

PDF_REPORT_VIS - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

PDFDocument - Class in edu.cornell.mannlib.vitro.webapp.visualization.visutils

PDFDocument(String, Map<String, Integer>, Document, PdfWriter) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.visutils.PDFDocument

people - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.VisualizationCaches

Cache of people

Person - Class in edu.cornell.mannlib.vitro.webapp.visualization.model

Person() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.model.Person

person() - Method in class edu.cornell.mannlib.vitro.webapp.web.templatemodels.individual.VIVOIndividualTemplateModel

PERSON_GRANT_COUNT_VIS - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

PERSON_LABEL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

PERSON_LEVEL_UTILS_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

PERSON_LEVEL_VIS - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

PERSON_PUBLICATION_COUNT_VIS - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

PERSON_TYPE - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

PERSON_TYPE_LABEL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

PERSON_URL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

PersonGrantCountQueryRunner - Class in edu.cornell.mannlib.vitro.webapp.visualization.persongrantcount

This query runner is used to execute a sparql query that will fetch all the publications defined by bibo:Document property for a particular individual.

PersonGrantCountQueryRunner(String, RDFService, Log) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.persongrantcount.PersonGrantCountQueryRunner

PersonGrantCountRequestHandler - Class in edu.cornell.mannlib.vitro.webapp.visualization.persongrantcount

This request handler is used to serve the content related to an individual's grants over the years like, 1.

PersonGrantCountRequestHandler() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.persongrantcount.PersonGrantCountRequestHandler

PersonGrantCountVisCodeGenerator - Class in edu.cornell.mannlib.vitro.webapp.visualization.persongrantcount

PersonGrantCountVisCodeGenerator(String, String, String, Map<String, Integer>, Log) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.persongrantcount.PersonGrantCountVisCodeGenerator

PersonHasAdviseeRelationshipGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

PersonHasAdviseeRelationshipGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasAdviseeRelationshipGenerator

PersonHasAdvisorRelationshipGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

PersonHasAdvisorRelationshipGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasAdvisorRelationshipGenerator

PersonHasAwardOrHonorGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

PersonHasAwardOrHonorGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasAwardOrHonorGenerator

PersonHasEducationalTraining - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

Form for adding an educational attainment to an individual Classes: core:EducationalProcess - primary new individual being created foaf:Person - existing individual foaf:Organization - new or existing individual core:AcademicDegree - existing individual core:AwardedDegree - new or existing individual There are 4 modes that this form can be in: 1.

PersonHasEducationalTraining() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasEducationalTraining

PersonHasEmailGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

PersonHasEmailGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasEmailGenerator

PersonHasIssuedCredentialGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

PersonHasIssuedCredentialGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasIssuedCredentialGenerator

PersonHasPositionHistoryGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

PersonHasPositionHistoryGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasPositionHistoryGenerator

PersonHasPreferredTitleGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

PersonHasPreferredTitleGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.PersonHasPreferredTitleGenerator

PersonHasPublicationValidator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing

PersonHasPublicationValidator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.PersonHasPublicationValidator

personLabels - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.VisualizationCaches

Display labels for people (uri -> label)

PersonLevelRequestHandler - Class in edu.cornell.mannlib.vitro.webapp.visualization.personlevel

This request handler is used to serve content rendered on the person level vis page like, 1.

PersonLevelRequestHandler() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.personlevel.PersonLevelRequestHandler

PersonPublicationCountQueryRunner - Class in edu.cornell.mannlib.vitro.webapp.visualization.personpubcount

This query runner is used to execute a sparql query that will fetch all the publications defined by bibo:Document property for a particular individual.

PersonPublicationCountQueryRunner(String, RDFService, Log) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.personpubcount.PersonPublicationCountQueryRunner

PersonPublicationCountRequestHandler - Class in edu.cornell.mannlib.vitro.webapp.visualization.personpubcount

This request handler is used to serve the content related to an individual's publications over the years like, 1.

PersonPublicationCountRequestHandler() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.personpubcount.PersonPublicationCountRequestHandler

PersonPublicationCountVisCodeGenerator - Class in edu.cornell.mannlib.vitro.webapp.visualization.personpubcount

PersonPublicationCountVisCodeGenerator(String, String, String, Map<String, Integer>, Log) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.personpubcount.PersonPublicationCountVisCodeGenerator

PersonPublicationMaps - Class in edu.cornell.mannlib.vitro.webapp.visualization.utilities

PersonPublicationMaps() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.utilities.PersonPublicationMaps

personToConcepts - Variable in class edu.cornell.mannlib.vitro.webapp.visualization.model.ConceptPeopleMap

personToGrant - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.VisualizationCaches

Person to grant (person uri -> grant uri)

PersonToGrantsModelConstructor - Class in edu.cornell.mannlib.vitro.webapp.visualization.modelconstructor

PersonToGrantsModelConstructor(String, RDFService) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.modelconstructor.PersonToGrantsModelConstructor

personToMostSpecificLabel - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.VisualizationCaches

Most specific type for person (uri -> label)

personToOrganizations - Variable in class edu.cornell.mannlib.vitro.webapp.visualization.model.OrganizationPeopleMap

personToPublication - Variable in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.PersonPublicationMaps

personToPublication - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.VisualizationCaches

Person to publication Map (person uri -> list of publication uri)

PI_LABEL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

PI_URL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

pictureBackdrop(float, float, PdfContentByte) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.PDFDocument

Prints a square and fills half of it with a gray rectangle.

pictureCircles(float, float, PdfContentByte) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.PDFDocument

Prints 3 circles in different colors that intersect with eachother.

populateExistingValues(String, int, OntModel) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.utils.ProcessInternalClassDataGetterN3

populateRestrictedClasses(Map<String, Object>, Map<String, Object>) - Method in class edu.cornell.mannlib.vitro.webapp.utils.menuManagement.ProcessInternalClasses

Retrieve and populate

POSSIBLE_DATE_TIME_FORMATTERS - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.VOConstants

PREDICATE - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

preferredTitle - Variable in class edu.cornell.mannlib.vitro.webapp.visualization.model.Person

PREFIX_TO_NAMESPACE - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryConstants

prepareResponse() - Method in class edu.cornell.mannlib.vitro.webapp.controller.ajax.GeoFocusMapLocations

prepareResponse() - Method in class edu.cornell.mannlib.vitro.webapp.controller.ajax.GeoFocusResearcherCount

prepareResponse() - Method in class edu.cornell.mannlib.vitro.webapp.controller.ajax.QrCodeDetails

preprocess(MultiValueEditSubmission, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.AddAssociatedConceptsPreprocessor

preprocess(Model, Model, HttpServletRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.ConceptSemanticTypesPreprocessor

preprocess(MultiValueEditSubmission, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.ManageLabelsForPersonPreprocessor

preprocess(MultiValueEditSubmission, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.RoleToPredicatePreprocessor

PresentationChecker - Class in edu.cornell.mannlib.vivo.auth.policy

Does the requested action involve a change to a Presentation that the self-editor is authorized to modify?

PresentationChecker(AbstractPropertyStatementAction) - Constructor for class edu.cornell.mannlib.vivo.auth.policy.PresentationChecker

prettyPrint(String) - Static method in class edu.cornell.mannlib.semservices.util.XMLUtils

prettyPrintToString(String) - Static method in class edu.cornell.mannlib.semservices.util.XMLUtils

ProcessInternalClassDataGetterN3 - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.utils

ProcessInternalClassDataGetterN3() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.utils.ProcessInternalClassDataGetterN3

ProcessInternalClasses - Class in edu.cornell.mannlib.vitro.webapp.utils.menuManagement

ProcessInternalClasses() - Constructor for class edu.cornell.mannlib.vitro.webapp.utils.menuManagement.ProcessInternalClasses

processRequest(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.controller.AboutQrCodesController

processRequest(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.controller.ExportQrCodeController

processRequest(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.controller.freemarker.InstitutionalInternalClassController

processRequest(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.controller.freemarker.ManageGrantsForIndividualController

processRequest(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.controller.freemarker.ManagePeopleForOrganizationController

processRequest(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.controller.freemarker.ManagePublicationsForIndividualController

processRequest(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.controller.harvester.FileHarvestController

processRequest(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.controller.visualization.ShortURLVisualizationController

processRequest(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.controller.visualization.StandardVisualizationController

processRequest(VitroRequest) - Method in class edu.cornell.mannlib.vivo.orcid.controller.OrcidIntegrationController

Look at the path info and delegate to a handler.

processResults(String) - Method in interface edu.cornell.mannlib.semservices.service.ExternalConceptService

processResults(String) - Method in class edu.cornell.mannlib.semservices.service.impl.AgrovocService

processResults(String) - Method in class edu.cornell.mannlib.semservices.service.impl.GemetService

processResults(String) - Method in class edu.cornell.mannlib.semservices.service.impl.LCSHService

processResults(String) - Method in class edu.cornell.mannlib.semservices.service.impl.UMLSService

processSubmission(VitroRequest, Resource) - Method in class edu.cornell.mannlib.vitro.webapp.utils.menuManagement.ProcessInternalClasses

PROFILE_INFO_UTILS_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

PROFILE_UTILS_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

ProjectHasParticipantGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

ProjectHasParticipantGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.ProjectHasParticipantGenerator

ProjectOrServiceChecker - Class in edu.cornell.mannlib.vivo.auth.policy

Does the requested action involve a change to a Project or Service that the self-editor is authorized to modify?

ProjectOrServiceChecker(AbstractPropertyStatementAction) - Constructor for class edu.cornell.mannlib.vivo.auth.policy.ProjectOrServiceChecker

PROPERTY_EXTERNAL_ID_COMMON_NAME - Static variable in class edu.cornell.mannlib.vivo.orcid.controller.OrcidIntegrationController

PUBLICATION_TEMPORAL_VIS_SHORT_URL - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

PublicationHasAuthorValidator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing

PublicationHasAuthorValidator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.PublicationHasAuthorValidator

publicationToJournal - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.VisualizationCaches

Publication to journal (publication uri -> journal label)

publicationToPerson - Variable in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.PersonPublicationMaps

publicationToYear - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.VisualizationCaches

Publication to year (publication uri -> year)

put(String, String) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.PersonPublicationMaps

Q

QrCodeAjaxController - Class in edu.cornell.mannlib.vitro.webapp.controller.ajax

Handle the AJAX functions that are specific to the "new" home page sections, at this point just the mapping of geographic locations.

QrCodeAjaxController() - Constructor for class edu.cornell.mannlib.vitro.webapp.controller.ajax.QrCodeAjaxController

QrCodeDetails - Class in edu.cornell.mannlib.vitro.webapp.controller.ajax

QrCodeDetails(HttpServlet, VitroRequest, HttpServletResponse) - Constructor for class edu.cornell.mannlib.vitro.webapp.controller.ajax.QrCodeDetails

QueryConstants - Class in edu.cornell.mannlib.vitro.webapp.visualization.constants

QueryConstants() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryConstants

QueryFieldLabels - Class in edu.cornell.mannlib.vitro.webapp.visualization.constants

Thsi contains the sparql fields which are used to capture data for the value objects.

QueryFieldLabels() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

QueryRunner<QueryResult> - Interface in edu.cornell.mannlib.vitro.webapp.visualization.visutils

R

RDF_RESULT_FORMAT_PARAM - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.VisConstants

RDFServiceCallable() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.utilities.CachingRDFServiceExecutor.RDFServiceCallable

Default constructor

RDFServiceCallable(CachingRDFServiceExecutor.Affinity) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.utilities.CachingRDFServiceExecutor.RDFServiceCallable

Constructor that allows an affinity object to be supplied

rebuild(CachingRDFServiceExecutor...) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.VisualizationCaches

Rebuild the specifield caches

rebuildAll() - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.VisualizationCaches

Rebuild all the caches

rebuildAll(RDFService) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.VisualizationCaches

Rebuild all the caches

recordConfirmation() - Method in class edu.cornell.mannlib.vivo.orcid.controller.OrcidAbstractHandler

register() - Static method in class edu.cornell.mannlib.vitro.webapp.web.templatemodels.searchresult.VIVOIndividualSearchResult

RELATIVE_LOCATION_OF_FM_VISUALIZATIONS_BEAN - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

RELATIVE_LOCATION_OF_VISUALIZATIONS_BEAN - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

removeConceptURIFromList(List<String>, String) - Static method in class edu.cornell.mannlib.semservices.util.SKOSUtils

removeModel(String, String) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.ConstructedModelTracker

RENDER_MODE_KEY - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

renderJson(ConceptInfo) - Method in class edu.cornell.mannlib.vitro.webapp.servlet.ConceptSearchServlet

REQUESTING_TEMPLATE_KEY - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

REQUIRED_ACTIONS - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.freemarker.InstitutionalInternalClassController

REQUIRED_ACTIONS - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.modelconstructor.ModelConstructorRequestHandler

REQUIRED_ACTIONS - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.tools.ToolsRequestHandler

requiredActions(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.controller.freemarker.InstitutionalInternalClassController

requiredActions(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.controller.freemarker.ManageGrantsForIndividualController

requiredActions(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.controller.freemarker.ManagePeopleForOrganizationController

requiredActions(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.controller.freemarker.ManagePublicationsForIndividualController

requiredActions(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.controller.visualization.AjaxVisualizationController

requiredActions(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.controller.visualization.ShortURLVisualizationController

requiredActions(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.controller.visualization.StandardVisualizationController

requiredActions(VitroRequest) - Method in class edu.cornell.mannlib.vivo.orcid.controller.OrcidIntegrationController

We return AUTHORIZED here, but we want the LogoutRedirector to know that the user should not remain on this page after logging out.

RESULT_FORMAT_PARAM - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.VisConstants

retrieveFields(int) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.utils.ProcessInternalClassDataGetterN3

retrieveLiteralsOnForm(int) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.utils.ProcessInternalClassDataGetterN3

retrieveN3Optional(int) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.utils.ProcessInternalClassDataGetterN3

retrieveN3Required(int) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.utils.ProcessInternalClassDataGetterN3

retrieveRestrictClasses(ServletContext, Map<String, Object>) - Method in class edu.cornell.mannlib.vitro.webapp.utils.dataGetter.InternalClassesDataGetter

ROLE_END_DATE - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

ROLE_START_DATE - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

RoleToActivityPredicatePreprocessor - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors

RoleToActivityPredicatePreprocessor(EditConfigurationVTwo, WebappDaoFactory) - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.RoleToActivityPredicatePreprocessor

roleToItemPredicate - Static variable in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.RoleToPredicatePreprocessor

RoleToPredicatePreprocessor - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors

RoleToPredicatePreprocessor(EditConfigurationVTwo, WebappDaoFactory) - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.RoleToPredicatePreprocessor

S

SCHOOL_COMPARISON_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

SCIENCE_UNLOCATED_JOURNALS_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

SearchResultTemplateModelSetup - Class in org.vivoweb.webapp.startup

SearchResultTemplateModelSetup() - Constructor for class org.vivoweb.webapp.startup.SearchResultTemplateModelSetup

SECONDARY_POSITION_LABEL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

SelfEditorRelationshipPolicy - Class in edu.cornell.mannlib.vivo.auth.policy

Permit self-editors to edit the properties of classes with which they share a special relationship.

SelfEditorRelationshipPolicy(ServletContext) - Constructor for class edu.cornell.mannlib.vivo.auth.policy.SelfEditorRelationshipPolicy

SelfEditorRelationshipPolicy.Setup - Class in edu.cornell.mannlib.vivo.auth.policy

When the system starts up, install the policy.

SemanticServicesError - Class in edu.cornell.mannlib.semservices.bo

SemanticServicesError() - Constructor for class edu.cornell.mannlib.semservices.bo.SemanticServicesError

SemanticServicesError(String, String, String) - Constructor for class edu.cornell.mannlib.semservices.bo.SemanticServicesError

SemanticServicesInfoBase - Class in edu.cornell.mannlib.semservices.bo

SemanticServicesInfoBase() - Constructor for class edu.cornell.mannlib.semservices.bo.SemanticServicesInfoBase

serializeDoc(Document) - Static method in class edu.cornell.mannlib.semservices.util.XMLUtils

serializeDoctoString(Document) - Static method in class edu.cornell.mannlib.semservices.util.XMLUtils

serializeNode(Node) - Static method in class edu.cornell.mannlib.semservices.util.XMLUtils

servletContext - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.AjaxVisualizationController

servletContext - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.ShortURLVisualizationController

servletContext - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.StandardVisualizationController

setActivityDate(String) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Activity

setActivityLabel(String) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Activity

setAltLabelList(List<String>) - Method in class edu.cornell.mannlib.semservices.bo.Concept

setBackgroundRDFService(RDFService) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.utilities.CachingRDFServiceExecutor

Set the RDF service to be used for background threads (called from a startup servlet)

setBestMatch(String) - Method in class edu.cornell.mannlib.semservices.bo.Concept

setBroaderURIList(List<String>) - Method in class edu.cornell.mannlib.semservices.bo.Concept

setBuiltFromCacheTime(Date) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.collaborationutils.CollaborationData

setCloseMatchURIList(List<String>) - Method in class edu.cornell.mannlib.semservices.bo.Concept

setCollaboratorName(String) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Collaborator

setConceptId(String) - Method in class edu.cornell.mannlib.semservices.bo.Concept

setConceptList(List<?>) - Method in class edu.cornell.mannlib.semservices.bo.ConceptInfo

setContextModels(ContextModelAccess) - Method in class edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.CalculateParameters

setContextModels(ContextModelAccess) - Method in class edu.cornell.mannlib.vitro.webapp.searchindex.extensions.LabelsAcrossContextNodes

setDefinedBy(String) - Method in class edu.cornell.mannlib.semservices.bo.Concept

setDefinition(String) - Method in class edu.cornell.mannlib.semservices.bo.Concept

setDownloadDataLink(String) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

setEarliestRenderedGrantYear(Integer) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

setEarliestRenderedPublicationYear(Integer) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

setEarliestYearConsidered(Integer) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

setEntityClass(VOConstants.EntityClassType) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SubEntity

setEntityLabel(String) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Entity

setEntityURI(String) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.JsonObject

setExactMatchURIList(List<String>) - Method in class edu.cornell.mannlib.semservices.bo.Concept

setException(String) - Method in class edu.cornell.mannlib.semservices.bo.SemanticServicesError

setFields(EditConfigurationVTwo, VitroRequest, String) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAuthorsToInformationResourceGenerator

Set Fields and supporting methods

setFields(EditConfigurationVTwo, VitroRequest, String, List<VClass>) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddConceptThroughObjectPropertyGenerator

setFields(EditConfigurationVTwo, VitroRequest, String) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditorsToInformationResourceGenerator

Set Fields and supporting methods

setFields(EditConfigurationVTwo, VitroRequest, String) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.VIVODefaultAddMissingIndividualFormGenerator

setFullTimelineNetworkLink(String) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

setId(Integer) - Method in class edu.cornell.mannlib.semservices.bo.BaseObject

setIncomingProperty(String) - Method in class edu.cornell.mannlib.vitro.webapp.searchindex.extensions.LabelsAcrossContextNodes

setIndividualLabel(String) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.ConstructedModel

setIndividualLabel(String) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.Individual

setLabel(String) - Method in class edu.cornell.mannlib.semservices.bo.Concept

setLabel(String) - Method in class edu.cornell.mannlib.vitro.webapp.searchindex.extensions.LabelsAcrossContextNodes

setLabel(String) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.JsonObject

setLabel(String) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.MapOfScience

setLastCachedAtDateTime(String) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.JsonObject

setLastCachedAtDateTime(String) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.MapOfScience

setLastCachedAtDateTime(String) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SubEntity

setLatestRenderedGrantYear(Integer) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

setLatestRenderedPublicationYear(Integer) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

setMessage(String) - Method in class edu.cornell.mannlib.semservices.bo.SemanticServicesError

setNarrowerURIList(List<String>) - Method in class edu.cornell.mannlib.semservices.bo.Concept

setNumOfYearsToBeRendered(int) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

setOrganizationTypes(List<String>) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.JsonObject

setOrganizationTypes(Set<String>) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.JsonObject

setOutgoingProperty(String) - Method in class edu.cornell.mannlib.vitro.webapp.searchindex.extensions.LabelsAcrossContextNodes

setParentURIToLabel(Set<Individual>) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.SubjectEntityJSON

setPublishedInJournal(String) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.MapOfScienceActivity

setPubsMapped(int) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.MapOfScience

setPubsWithInvalidJournals(int) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.MapOfScience

setPubsWithNoJournals(int) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.MapOfScience

setRenderedSparks(Integer) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

setSchemeURI(String) - Method in class edu.cornell.mannlib.semservices.bo.Concept

setSemanticServicesError(SemanticServicesError) - Method in class edu.cornell.mannlib.semservices.bo.SemanticServicesInfoBase

setSeverity(String) - Method in class edu.cornell.mannlib.semservices.bo.SemanticServicesError

setShortVisMode(boolean) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

setSubdisciplineActivity(Map<Integer, Float>) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.MapOfScience

setSubjectEntityLabel(String) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.SubjectEntityJSON

setSubjectEntityURI(String) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.SubjectEntityJSON

setTemplate(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAssociatedConceptGenerator

setTemplate(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator

setTemplate(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddUserDefinedConceptGenerator

setTemplateName() - Method in class edu.cornell.mannlib.vitro.webapp.utils.dataGetter.InternalClassesDataGetter

setTotalCollaborationshipCount(Integer) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

setType(String) - Method in class edu.cornell.mannlib.semservices.bo.Concept

setType(String) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.MapOfScience

setUnknownYearGrants(Integer) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

setUnknownYearPublications(Integer) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

Setup() - Constructor for class edu.cornell.mannlib.vivo.auth.policy.SelfEditorRelationshipPolicy.Setup

setupConfig(VitroRequest, HttpSession) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditWebpageFormGenerator

setupVariableNames() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.RoleToActivityPredicatePreprocessor

setupVariableNames() - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.RoleToPredicatePreprocessor

setUri(String) - Method in class edu.cornell.mannlib.semservices.bo.Concept

setUri(String) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.MapOfScience

setUrisAndLiteralsOnForm(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddAuthorsToInformationResourceGenerator

setUrisAndLiteralsOnForm(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddEditorsToInformationResourceGenerator

setUrisAndLiteralsOnForm(EditConfigurationVTwo, VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.VIVODefaultAddMissingIndividualFormGenerator

setVisContainerDivID(String) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

setVisMode(String) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.JsonObject

setVisualizations(Map<String, VisualizationRequestHandler>) - Method in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationInjector

setYearToActivityCount(List<List<Integer>>) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.JsonObject

setYearToActivityCount(Map<String, Integer>) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

setYearToEntityCountDataTable(List<YearToEntityCountDataElement>) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

SHORT_SPARKLINE_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

SHORT_URL_REQUEST_PATTERN - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

SHORT_URL_VISUALIZATION_REQUEST_PREFIX - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

ShortURLVisualizationController - Class in edu.cornell.mannlib.vitro.webapp.controller.visualization

Services a standard visualization request, which involves templates.

ShortURLVisualizationController() - Constructor for class edu.cornell.mannlib.vitro.webapp.controller.visualization.ShortURLVisualizationController

show500InternalServerError(String) - Method in class edu.cornell.mannlib.vivo.orcid.controller.OrcidAbstractHandler

showConfirmationPage(OrcidConfirmationState.Progress, OrcidMessage...) - Method in class edu.cornell.mannlib.vivo.orcid.controller.OrcidAbstractHandler

showConfirmationPage() - Method in class edu.cornell.mannlib.vivo.orcid.controller.OrcidAbstractHandler

shutdown() - Method in class edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.CalculateParameters

shutdown() - Method in class edu.cornell.mannlib.vitro.webapp.searchindex.extensions.LabelsAcrossContextNodes

SKOSUtils - Class in edu.cornell.mannlib.semservices.util

SKOSUtils() - Constructor for class edu.cornell.mannlib.semservices.util.SKOSUtils

slugify(String) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.UtilityFunctions

Currently the approach for slugifying filenames is naive.

SparklineData - Class in edu.cornell.mannlib.vitro.webapp.visualization.valueobjects

SparklineData() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SparklineData

sparqlSelectQuery(RDFService, ResultSetConsumer) - Method in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.GenericQueryRunner

STANDALONE_RENDER_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

StandardVisualizationController - Class in edu.cornell.mannlib.vitro.webapp.controller.visualization

Services a standard visualization request, which involves templates.

StandardVisualizationController() - Constructor for class edu.cornell.mannlib.vitro.webapp.controller.visualization.StandardVisualizationController

START_YEAR_LABEL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

startIndexing() - Method in class edu.cornell.mannlib.vitro.webapp.searchindex.extensions.LabelsAcrossContextNodes

stashFileSizeException() - Method in class edu.cornell.mannlib.vitro.webapp.controller.harvester.FileHarvestController

state - Variable in class edu.cornell.mannlib.vivo.orcid.controller.OrcidAbstractHandler

stripConceptId(String) - Method in class edu.cornell.mannlib.semservices.service.impl.AgrovocService

stripConceptId(String) - Method in class edu.cornell.mannlib.semservices.service.impl.GemetService

stripConceptId(String) - Method in class edu.cornell.mannlib.semservices.service.impl.LCSHService

stripConceptId(String) - Method in class edu.cornell.mannlib.semservices.service.impl.UMLSService

SUB_DISCIPLINE_ID_TO_DISCIPLINE_ID - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.MapOfScienceConstants

SUB_DISCIPLINE_ID_TO_LABEL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.MapOfScienceConstants

SUBDISCIPLINE_TO_ACTIVTY_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

SubEntity - Class in edu.cornell.mannlib.vitro.webapp.visualization.valueobjects

SubEntity(String) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SubEntity

SubEntity(String, String) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SubEntity

SubjectEntityJSON - Class in edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json

SubjectEntityJSON(String, String, Set<Individual>) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.SubjectEntityJSON

SubjectEntityJSON(String, String, Map<String, String>) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.json.SubjectEntityJSON

SubjectHasMailingAddressGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

SubjectHasMailingAddressGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.SubjectHasMailingAddressGenerator

SubjectHasPhoneFaxNumberGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

SubjectHasPhoneFaxNumberGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.SubjectHasPhoneFaxNumberGenerator

SUBORGANIZATION_LABEL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

SUBORGANIZATION_TYPE - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

SUBORGANIZATION_TYPE_LABEL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

SUBORGANIZATION_URL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

SYNTAX - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.AjaxVisualizationController

SYNTAX - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.DataVisualizationController

SYNTAX - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.ShortURLVisualizationController

SYNTAX - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.StandardVisualizationController

SYNTAX - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.coauthorship.CoAuthorshipQueryRunner

SYNTAX - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.coprincipalinvestigator.CoPIGrantCountConstructQueryRunner

SYNTAX - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.coprincipalinvestigator.CoPIGrantCountQueryRunner

SYNTAX - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.modelconstructor.PersonToGrantsModelConstructor

SYNTAX - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.persongrantcount.PersonGrantCountQueryRunner

SYNTAX - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.personpubcount.PersonPublicationCountQueryRunner

SYNTAX - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.AllPropertiesQueryRunner

SYNTAX - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.GenericQueryRunner

SYNTAX - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.visutils.GenericQueryRunnerOnModel

T

TemplateModelSetup - Class in org.vivoweb.webapp.startup

TemplateModelSetup() - Constructor for class org.vivoweb.webapp.startup.TemplateModelSetup

TemporalGrantVisualizationRequestHandler - Class in edu.cornell.mannlib.vitro.webapp.visualization.temporalgraph

TemporalGrantVisualizationRequestHandler() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.temporalgraph.TemporalGrantVisualizationRequestHandler

temporalGraphUrl() - Method in class edu.cornell.mannlib.vitro.webapp.web.templatemodels.individual.VIVOIndividualTemplateModel

TemporalPublicationVisualizationRequestHandler - Class in edu.cornell.mannlib.vitro.webapp.visualization.temporalgraph

TemporalPublicationVisualizationRequestHandler() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.temporalgraph.TemporalPublicationVisualizationRequestHandler

THUMBNAIL_FILENAME - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

THUMBNAIL_LOCATION_URL - Static variable in class edu.cornell.mannlib.vitro.webapp.visualization.constants.QueryFieldLabels

thumbnailUrl - Variable in class edu.cornell.mannlib.vitro.webapp.visualization.model.Person

ToolsRequestHandler - Class in edu.cornell.mannlib.vitro.webapp.visualization.tools

ToolsRequestHandler() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.tools.ToolsRequestHandler

toString() - Method in class edu.cornell.mannlib.vitro.webapp.searchindex.documentBuilding.CalculateParameters

toString() - Method in class edu.cornell.mannlib.vitro.webapp.searchindex.extensions.LabelsAcrossContextNodes

toString() - Method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.SubEntity

toString() - Method in class edu.cornell.mannlib.vivo.auth.policy.SelfEditorRelationshipPolicy

trackModel(String, Model) - Static method in class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.ConstructedModelTracker

U

UMLSService - Class in edu.cornell.mannlib.semservices.service.impl

UMLSService() - Constructor for class edu.cornell.mannlib.semservices.service.impl.UMLSService

UniqueIDGenerator - Class in edu.cornell.mannlib.vitro.webapp.visualization.visutils

UniqueIDGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.visutils.UniqueIDGenerator

UNIVERSITY_COMPARISON_VIS_MODE - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

uri - Variable in class edu.cornell.mannlib.vitro.webapp.visualization.model.Person

URL_ENCODING_SCHEME - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.AjaxVisualizationController

URL_ENCODING_SCHEME - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.DataVisualizationController

URL_ENCODING_SCHEME - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.ShortURLVisualizationController

URL_ENCODING_SCHEME - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.StandardVisualizationController

useProcessor(VitroRequest) - Method in class edu.cornell.mannlib.vitro.webapp.utils.menuManagement.ProcessInternalClasses

Process submission

UTILITIES_VIS - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

UtilitiesRequestHandler - Class in edu.cornell.mannlib.vitro.webapp.visualization.utilities

This request handler is used when you need helpful information to add more context to the visualization.

UtilitiesRequestHandler() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.utilities.UtilitiesRequestHandler

UtilityFunctions - Class in edu.cornell.mannlib.vitro.webapp.visualization.visutils

UtilityFunctions() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.visutils.UtilityFunctions

V

validate(EditConfigurationVTwo, MultiValueEditSubmission) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.AutocompleteRequiredInputValidator

validate(EditConfigurationVTwo, MultiValueEditSubmission) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.FirstAndLastNameValidator

validate(EditConfigurationVTwo, MultiValueEditSubmission) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.PersonHasPublicationValidator

validate(EditConfigurationVTwo, MultiValueEditSubmission) - Method in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.PublicationHasAuthorValidator

validate() - Method in class edu.cornell.mannlib.vitro.webapp.searchindex.extensions.LabelsAcrossContextNodes

valueOf(String) - Static method in enum edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator.RoleActivityOptionTypes

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddRoleToPersonTwoStageGenerator.RoleActivityOptionTypes

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum edu.cornell.mannlib.vitro.webapp.visualization.constants.VisConstants.DataVisMode

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum edu.cornell.mannlib.vitro.webapp.visualization.constants.VOConstants.EntityClassType

Returns the enum constant of this type with the specified name.

values() - Static method in enum edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddGrantRoleToPersonGenerator.RoleActivityOptionTypes

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.AddRoleToPersonTwoStageGenerator.RoleActivityOptionTypes

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum edu.cornell.mannlib.vitro.webapp.visualization.constants.VisConstants.DataVisMode

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum edu.cornell.mannlib.vitro.webapp.visualization.constants.VOConstants.EntityClassType

Returns an array containing the constants of this enum type, in the order they are declared.

VIS_CONTAINER_KEY - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

VIS_MODE_KEY - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

VIS_TYPE_KEY - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

VisConstants - Class in edu.cornell.mannlib.vitro.webapp.visualization.constants

This contains constants related to the visualization code.

VisConstants() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.constants.VisConstants

VisConstants.DataVisMode - Enum in edu.cornell.mannlib.vitro.webapp.visualization.constants

VISUALIZATION_URL_PREFIX - Static variable in class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

VisualizationCaches - Class in edu.cornell.mannlib.vitro.webapp.visualization.utilities

Holder for the caches we are using in the visualizations String.intern() was a problem pre-Java 7, but has greater utility now.

VisualizationCaches() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.utilities.VisualizationCaches

VisualizationFrameworkConstants - Class in edu.cornell.mannlib.vitro.webapp.controller.visualization

VisualizationFrameworkConstants() - Constructor for class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationFrameworkConstants

VisualizationInjector - Class in edu.cornell.mannlib.vitro.webapp.controller.visualization

VisualizationInjector() - Constructor for class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationInjector

VisualizationRequestHandler - Interface in edu.cornell.mannlib.vitro.webapp.visualization.visutils

This interface is being implemented by all the visualization request handlers like PersonLevelRequestHandler, PersonPublicationCountRequestHandler, UtilitiesRequestHandler etc.

VisualizationsDependencyInjector - Class in edu.cornell.mannlib.vitro.webapp.controller.visualization

VisualizationsDependencyInjector() - Constructor for class edu.cornell.mannlib.vitro.webapp.controller.visualization.VisualizationsDependencyInjector

VisualizationSetup - Class in edu.cornell.mannlib.vitro.webapp.visualization.setup

Setup class for Visualizations, in order to record a context-referenced RDFService If this class is missing, caches can not be refreshed in the background

VisualizationSetup() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.setup.VisualizationSetup

VivoBaseGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

Adds static Strings that may be useful for forms that are part of VIVO.

VivoBaseGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.VivoBaseGenerator

VIVODefaultAddMissingIndividualFormGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

Generates the edit configuration for a default property form.

VIVODefaultAddMissingIndividualFormGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.VIVODefaultAddMissingIndividualFormGenerator

VIVOIndividualSearchResult - Class in edu.cornell.mannlib.vitro.webapp.web.templatemodels.searchresult

VIVOIndividualSearchResult(Individual, VitroRequest) - Constructor for class edu.cornell.mannlib.vitro.webapp.web.templatemodels.searchresult.VIVOIndividualSearchResult

VIVOIndividualTemplateModel - Class in edu.cornell.mannlib.vitro.webapp.web.templatemodels.individual

VIVOIndividualTemplateModelBuilder - Class in edu.cornell.mannlib.vitro.webapp.web.templatemodels.individual

VIVOIndividualTemplateModelBuilder() - Constructor for class edu.cornell.mannlib.vitro.webapp.web.templatemodels.individual.VIVOIndividualTemplateModelBuilder

VIVOListedIndividual - Class in edu.cornell.mannlib.vitro.webapp.web.templatemodels.individuallist

VIVOListedIndividualBuilder - Class in edu.cornell.mannlib.vitro.webapp.web.templatemodels.individuallist

VIVOListedIndividualBuilder() - Constructor for class edu.cornell.mannlib.vitro.webapp.web.templatemodels.individuallist.VIVOListedIndividualBuilder

VIVOManageLabelsGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

This generator selects the actual generator to be employed based on whether the individual is a Person or another individual.

VIVOManageLabelsGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.VIVOManageLabelsGenerator

VIVOMenuManagementDataUtils - Class in edu.cornell.mannlib.vitro.webapp.utils.menuManagement

VIVOMenuManagementDataUtils() - Constructor for class edu.cornell.mannlib.vitro.webapp.utils.menuManagement.VIVOMenuManagementDataUtils

VIVONewIndividualFormGenerator - Class in edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators

Generates the edit configuration for a default property form.

VIVONewIndividualFormGenerator() - Constructor for class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.generators.VIVONewIndividualFormGenerator

VIVOSiteAdminController - Class in edu.cornell.mannlib.vitro.webapp.controller.freemarker

VIVOSiteAdminController() - Constructor for class edu.cornell.mannlib.vitro.webapp.controller.freemarker.VIVOSiteAdminController

VocabSourceDescription - Class in edu.cornell.mannlib.vitro.webapp.utils.ConceptSearchService

VocabSourceDescription(String, String, String, String) - Constructor for class edu.cornell.mannlib.vitro.webapp.utils.ConceptSearchService.VocabSourceDescription

VOConstants - Class in edu.cornell.mannlib.vitro.webapp.visualization.constants

This contains the constants related to all the value objects.

VOConstants() - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.constants.VOConstants

VOConstants.EntityClassType - Enum in edu.cornell.mannlib.vitro.webapp.visualization.constants

vreq - Variable in class edu.cornell.mannlib.vivo.orcid.controller.OrcidAbstractHandler

W

wadf - Variable in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.RoleToPredicatePreprocessor

wdf - Variable in class edu.cornell.mannlib.vitro.webapp.edit.n3editing.configuration.preprocessors.AddAssociatedConceptsPreprocessor

writer - Static variable in class edu.cornell.mannlib.semservices.util.XMLUtils

X

XMLUtils - Class in edu.cornell.mannlib.semservices.util

Convenience Class to parse XML strings to DOM Document for XML contents retrieval.

XMLUtils() - Constructor for class edu.cornell.mannlib.semservices.util.XMLUtils

Y

YearToEntityCountDataElement - Class in edu.cornell.mannlib.vitro.webapp.visualization.valueobjects

This object is used to store information about the yearToEntityCount Map in the format easily expressed to Google Visualization's DataTableAPI.

YearToEntityCountDataElement(int, String, int) - Constructor for class edu.cornell.mannlib.vitro.webapp.visualization.valueobjects.YearToEntityCountDataElement

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